| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1384 |
|---|
| Symbol | |
|---|
| ID | 4038187 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | + |
|---|
| Start bp | 1492490 |
|---|
| End bp | 1493452 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637976768 |
|---|
| Product | alpha/beta hydrolase fold |
|---|
| Protein accession | YP_583536 |
|---|
| Protein GI | 94310326 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.276644 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.809393 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCCTG TAGATTCCGC ACATCCTGAG TTCCCTCCGC CCGCTCCGAC ACACTTCGCC
GTGCAGTCCG GCCCAGTGAG GCTGGCTGCC ACAGCGTGGG GCGATCCGGG CCATCCGGTG
GTCGTGCTCG TGCACGGCTA TCCGGACAAC AGCCATGTCT GGCATGGCGT GGCGCAAGCC
TTGGCCGGCC GCTTCCGTGT GGTGGCCTAC GATGTGCGCG GTGCTGGGGC ATCCGATGTG
CCGGCTGGCG TGGCGGATTA CCGGCTCGAA CGCCTGGCCG ACGACTTCAT CGCTGTCATC
GACGCGGTGT CGCCGGATCG GCCGGTGCAT CTGGTGGGCC ACGACTGGGG TTCGATCCAG
GGATGGGAGT TCGTGACTGA TCCGCGTCTC TACGGTCGCA TCGCCTCGTT CACCTCCTGT
TCCGGGCCTT GCCTCGATCA CGCCGCCCGC GCGTTGCGCG AGCCGCCCCG GCACTGGGGC
GCCACGCTGC GTCAGGCACT GGCATCGTGG TACATCGTGT TCTTCCATAT TCCCGGCTTG
CCAGAGTGGA ACTGGAAACT CTGGCTGGGA CGTAACTGGA CGTTCTGGCT GCGCCGGACG
GAAGGGCTCC ATACCGCCGC CAACCCGACG CAGACCGCCG ATGGCGTCCA TGGCCTGCGC
CTGTACCGCG CCAACATCAG AACCCGATTG CGTCATCCGC ACAACCGCCA CGCGCACGCG
CCGGTGCAGG TGATTGTGCC GACACGCGAC CGCTATGTGC GCCCCGCCGT GACGGAAGGC
GTGGGACGCT GGGCCGCACA GTCGTGGCGG CGTCCCGTGG ATGCCCACCA CTGGTTTCCA
CTTGCCGATC CTCACCGCAT GGCGGCAATG GTGCGCGAAT TTGTCGACCA TCTTCAGGGC
GCGCCAGCGT CCCCCGCGCT GCAATCTGCA CGTGTTACGT CGGAGGCAGG CAAAATTTCA
TAA
|
|---|
| Protein sequence | MTPVDSAHPE FPPPAPTHFA VQSGPVRLAA TAWGDPGHPV VVLVHGYPDN SHVWHGVAQA
LAGRFRVVAY DVRGAGASDV PAGVADYRLE RLADDFIAVI DAVSPDRPVH LVGHDWGSIQ
GWEFVTDPRL YGRIASFTSC SGPCLDHAAR ALREPPRHWG ATLRQALASW YIVFFHIPGL
PEWNWKLWLG RNWTFWLRRT EGLHTAANPT QTADGVHGLR LYRANIRTRL RHPHNRHAHA
PVQVIVPTRD RYVRPAVTEG VGRWAAQSWR RPVDAHHWFP LADPHRMAAM VREFVDHLQG
APASPALQSA RVTSEAGKIS
|
|---|
| |