| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1348 |
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| Symbol | |
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| ID | 4038151 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 1457397 |
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| End bp | 1458101 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637976732 |
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| Product | conjugal transfer protein TrbF |
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| Protein accession | YP_583500 |
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| Protein GI | 94310290 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3701] Type IV secretory pathway, TrbF components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.000109379 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGATTCA GAAAACCGCA GGTGCGCTAT GCCGACACGC CGCAGCCTGC CACGCCGTAC
CAAGCTGCCG GCCAGGTGTG GGACGACCGT ATCGGCTCGC CGCGCGTGCA GGCGAAGAAC
TGGCGCCTGA TGGCCTTCGG CTGTCTGACG CTCGCGCTGT TGATGGCCGG CGGCCTGGTG
TGGCGCTCGG CGCAGTCCTT CGTGACGCCC TACGTCGTGG AGGTGGACAA CGCGGGCCAG
GTGCGCGCCG TGGGCGAAGC CGCCACGCCG TACCGGCCCA ACGATGCACA GACGGCGCAC
CACATCGCGC GCTTCGTGAC GCTGGTGCGC TCGCTGTCCA TCGACCCCAT CGTCGTCCGC
CAGAACTGGC TGGACGCCTA CGATTACACG ACCGACAAGG GCGCGGCCGT GCTCAACGAC
TACGCGCGAG TCAACGACCC GTTCGCGCGC ATCGGCAAGG AGTCGGTGAC GGTGCAGATC
ACCAGCGTCG TGCGCGCCAG CGACACGTCT TTCAACGTGC GCTGGACGGA ACGCCGCTAC
GTCAACGGCG CCGCGGCGGG CCTGGAGCGG TGGACGGCCG TGGTGTCCAT CGTGCTCCAG
CCGCCGCGCA CCGAAGAACG CCTGCGCAAG AACCCCCTGG GCATCTACGT CAACGGCCTG
TCGTGGAGCC GCGAACTGGA TTCTTCCGAA GGAGCCAAGC CATGA
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| Protein sequence | MRFRKPQVRY ADTPQPATPY QAAGQVWDDR IGSPRVQAKN WRLMAFGCLT LALLMAGGLV
WRSAQSFVTP YVVEVDNAGQ VRAVGEAATP YRPNDAQTAH HIARFVTLVR SLSIDPIVVR
QNWLDAYDYT TDKGAAVLND YARVNDPFAR IGKESVTVQI TSVVRASDTS FNVRWTERRY
VNGAAAGLER WTAVVSIVLQ PPRTEERLRK NPLGIYVNGL SWSRELDSSE GAKP
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