Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_1333 |
Symbol | |
ID | 4038136 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 1444571 |
End bp | 1445317 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637976717 |
Product | acetoacetyl-CoA reductase |
Protein accession | YP_583485 |
Protein GI | 94310275 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | [TIGR01829] acetoacetyl-CoA reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.58717 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATACGA CGCAACGGAC GGCGCTCGTG ACGGGAGGCA ACCGGGGGTT GGGCGCTGCG ATCGCCCGTG CCCTGCACGA TGCCGGCCAC CGCGTGATCG TCACGCATAC CCCCGGCAAC ACCACGATTG GCCAGTGGCA GCAAGCGCAA GCGACACAGG GCTACTCATT TGCCGCCTAC GGGGTGGATG TATCGGACTA CGAATCAACG CAGGAACTGG CGCGGCGCAT CCACGCCGAC GGTCATCGGA TCGACATCCT GGTGAACAAC GCCGGCATCA CCCGCGATGC AACGCTGCGC AAGCTCGACA AGGCCGGTTG GGATGCCGTA CTGCGCACCA ACCTGGACTC CATGTTCAAC GTCACCAAGC CGTTCATCGA CCCGATGGCC GAGCGCGGCT GGGGCCGCAT CGTCAACATC TCTTCGATCA ACGGCAGCAA GGGCCAGTTC GGGCAGACCA ATTATTCGGC GGCCAAGGCC GGGGTACATG GATTCACCAA GGCGCTCGCA CAGGAGGTGG CGCGCAAGGG CGTGACGGTC AACACCGTCT CGCCGGGCTA TCTGGCCACC GAGATGGTGA TGGCGGTGCG AGAGGACATG CGCCAGAAGA TCATCGATGC GATTCCGGTT GGCCGTCTCG GCCAGCCGGC CGAGATTGCA GCTCTTGTCG CCTTCATCGC CAGCGAAGCC GCCGCCTTCA TGACCGGCAG CAACGTGGCG ATGAACGGCG GTCAGCACAT GTCTTGA
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Protein sequence | MNTTQRTALV TGGNRGLGAA IARALHDAGH RVIVTHTPGN TTIGQWQQAQ ATQGYSFAAY GVDVSDYEST QELARRIHAD GHRIDILVNN AGITRDATLR KLDKAGWDAV LRTNLDSMFN VTKPFIDPMA ERGWGRIVNI SSINGSKGQF GQTNYSAAKA GVHGFTKALA QEVARKGVTV NTVSPGYLAT EMVMAVREDM RQKIIDAIPV GRLGQPAEIA ALVAFIASEA AAFMTGSNVA MNGGQHMS
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