Gene Rmet_1333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1333 
Symbol 
ID4038136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1444571 
End bp1445317 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content64% 
IMG OID637976717 
Productacetoacetyl-CoA reductase 
Protein accessionYP_583485 
Protein GI94310275 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01829] acetoacetyl-CoA reductase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.58717 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACGA CGCAACGGAC GGCGCTCGTG ACGGGAGGCA ACCGGGGGTT GGGCGCTGCG 
ATCGCCCGTG CCCTGCACGA TGCCGGCCAC CGCGTGATCG TCACGCATAC CCCCGGCAAC
ACCACGATTG GCCAGTGGCA GCAAGCGCAA GCGACACAGG GCTACTCATT TGCCGCCTAC
GGGGTGGATG TATCGGACTA CGAATCAACG CAGGAACTGG CGCGGCGCAT CCACGCCGAC
GGTCATCGGA TCGACATCCT GGTGAACAAC GCCGGCATCA CCCGCGATGC AACGCTGCGC
AAGCTCGACA AGGCCGGTTG GGATGCCGTA CTGCGCACCA ACCTGGACTC CATGTTCAAC
GTCACCAAGC CGTTCATCGA CCCGATGGCC GAGCGCGGCT GGGGCCGCAT CGTCAACATC
TCTTCGATCA ACGGCAGCAA GGGCCAGTTC GGGCAGACCA ATTATTCGGC GGCCAAGGCC
GGGGTACATG GATTCACCAA GGCGCTCGCA CAGGAGGTGG CGCGCAAGGG CGTGACGGTC
AACACCGTCT CGCCGGGCTA TCTGGCCACC GAGATGGTGA TGGCGGTGCG AGAGGACATG
CGCCAGAAGA TCATCGATGC GATTCCGGTT GGCCGTCTCG GCCAGCCGGC CGAGATTGCA
GCTCTTGTCG CCTTCATCGC CAGCGAAGCC GCCGCCTTCA TGACCGGCAG CAACGTGGCG
ATGAACGGCG GTCAGCACAT GTCTTGA
 
Protein sequence
MNTTQRTALV TGGNRGLGAA IARALHDAGH RVIVTHTPGN TTIGQWQQAQ ATQGYSFAAY 
GVDVSDYEST QELARRIHAD GHRIDILVNN AGITRDATLR KLDKAGWDAV LRTNLDSMFN
VTKPFIDPMA ERGWGRIVNI SSINGSKGQF GQTNYSAAKA GVHGFTKALA QEVARKGVTV
NTVSPGYLAT EMVMAVREDM RQKIIDAIPV GRLGQPAEIA ALVAFIASEA AAFMTGSNVA
MNGGQHMS