Gene Rmet_1294 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1294 
Symbol 
ID4038097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1410478 
End bp1410861 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content68% 
IMG OID637976680 
ProductXRE family plasmid maintenance system antidote protein 
Protein accessionYP_583448 
Protein GI94310238 
COG category[R] General function prediction only 
COG ID[COG3093] Plasmid maintenance system antidote protein 
TIGRFAM ID[TIGR02607] addiction module antidote protein, HigA family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.000401984 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.503235 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATCAAGG CATCTCTCTC GTTCTGTTTC TTCATCATGA CGCGCATTGG TCCACGTTCA 
TCGCACCCTG CCGCACCGGT TCTTCCGCCG GTGGGTGTGC CGCTGCGCGT GCCCACGCAC
CCTGGGCGGC TGCTGGCGCG CACCTGCTTG TTGCCGCTGG CGTTGAACCA GAGCGAGGCG
GCCCGGCTGC TGGGCCTCTC GCGCCGCCGC CTGCACGAGC TGGTGCATGG CCAGCGCGCA
ATGTCGCCCG ACACCGCCAT CCGTTGTGCG CGTCAGTTCG GCATCGACGC CGGCTTCTGG
CTCGCGCAGC AGGCCGCCTG GGACAGCTTC CACGCCTGGA AGCGCCTGTC CTCGGGTTCG
GCCACGTCCC CTTTCCCCCG CTGA
 
Protein sequence
MIKASLSFCF FIMTRIGPRS SHPAAPVLPP VGVPLRVPTH PGRLLARTCL LPLALNQSEA 
ARLLGLSRRR LHELVHGQRA MSPDTAIRCA RQFGIDAGFW LAQQAAWDSF HAWKRLSSGS
ATSPFPR