| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1254 |
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| Symbol | |
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| ID | 4038057 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 1375860 |
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| End bp | 1376717 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637976640 |
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| Product | putative replication initiator and transcription repressor protein |
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| Protein accession | YP_583408 |
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| Protein GI | 94310198 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG5534] Plasmid replication initiator protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0838282 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAGCA CCGCGCTGCC CATGCGGCAG CGGCCGTTGC AGGAGCGCGA ACAGCTCGAC
CTGTTCCGCG CCTTGCCCGG CGACATGGCA CCGCGCGACA GCCAGGATTT GATGGCCTAT
CCGTTCTTCT CGCTCGCCAA GTCCAAGCGG GTCAAGCCCA TCGACTTCCG CGCGGGCAAC
GTGACTATCC GCGTGGAGGG CACGCAGGAG CACGGCATCG CCACGATTTG GGATGCGGAC
GTGCTGATAT GGGCAGCTTC GCAGATCGTG GAGGCGAAGG ACGCGGGCCT GCGCCCGTCG
CGGCTGATGC GCGCCACGCC CTACGAGATC CTGCGCTTCA TTGGACGCGG CAAGTCGCTG
CGCGACTACC AGCGCCTCAA GGCCGCGCTC GACCGGCTGC AATCGACCAC GGTGGCCACG
TCCATCCGAG AAACCACTGG AAGGCGCTTG CATCGCTTCT CGTGGATCAA CGAATGGAAG
GAACTGGCCG ATGCCAGCGG CACGCCGCTG GGCATCGAGC TGATCCTGCC GGACTGGTTC
TATGCGGGCG TGCTCGACGC CGCCCTGGTG CTGACCATCG ACCCGGCGTA CTTCCGGCTC
ACTGGAGGAA TCGAGCGGTG GCTGTACCGC CTGGTGCGCA AGCACGGCGG CAAGCAGGCA
TACGGCTGGC AGTTCGACTT TCGCTACCTG CACCAGAAAT CCGGCAGCAC CGCCAAGCCC
TACGACTTCG CCTGCGACCT GCGCGCGCTG GTCGCGCGGC AATCGCTGCC CGGCTACGTC
CTGGGCATCG AGCGGATGCC GGACAACGGC ATGGAGCTGC TGACCTTCCG GCCCGTGCCG
CAGACGGCAT GGGGATAA
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| Protein sequence | MSSTALPMRQ RPLQEREQLD LFRALPGDMA PRDSQDLMAY PFFSLAKSKR VKPIDFRAGN
VTIRVEGTQE HGIATIWDAD VLIWAASQIV EAKDAGLRPS RLMRATPYEI LRFIGRGKSL
RDYQRLKAAL DRLQSTTVAT SIRETTGRRL HRFSWINEWK ELADASGTPL GIELILPDWF
YAGVLDAALV LTIDPAYFRL TGGIERWLYR LVRKHGGKQA YGWQFDFRYL HQKSGSTAKP
YDFACDLRAL VARQSLPGYV LGIERMPDNG MELLTFRPVP QTAWG
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