| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1224 |
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| Symbol | |
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| ID | 4038027 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 1343603 |
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| End bp | 1345252 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637976611 |
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| Product | benzoate-CoA ligase |
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| Protein accession | YP_583379 |
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| Protein GI | 94310169 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | [TIGR02262] benzoate-CoA ligase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.231141 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0338885 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCCCC CGATCTCGAG CGCTGGCCAG GCCGGCTGCG CCACCGCATC GACCGACCCC
CGTGCCGAAA CGGCGATTGC CGCGTTGCCG CCGCGCTATA ACGCCGCCGA GGATTTGCTG
ACACGTAACC TTGTCGCAGG ACGGGGCGTC AGGACGGCAT ACATTGATGA CGCGGGCAGC
CTGACCTTCG CCGAACTCGA CGACCGCTGC CGCCGTTTCG CCGGCGCGCT GTTGCGGGCG
GGCTTCCGCC GCGAGGAGCG TGTACTGCTC TGCGCGTTCG ATACGATCGA CTTTCCCACC
GTGTTTCTTG GCTGCCTGCT TGCCGGCGTG GTGCCGGTGG CGGTCAATAC GCTGCTGACG
ACCGAGGACT ACGCCTACAT GCTGGAGCAC AGCGGGGCGC GGGCGGTGGT GGTCTCGGCG
CAATTGCTGC CGACGATGCG CGCGGCTATG ACCAAGGCGG GTGTCACACC GGATCTGATC
GTGGCCGCGC CGCATACCGA GGATTCGGCC AAGGCGGCCA ATACGGTCAG CGCCATGGCG
GCGAGCGCGC CGCCGTTGGC GCAATCCGTC GCAACCGGGC CCGACGATAT GGCGTTCTGG
TTGTACTCCT CCGGGTCGAC TGGTCGGCCC AAAGGCACGG TCCACACGCA TGGCAACCTG
TTTCACACCG CCGATCTCTA CGCGCGTCGC GTGCTGGGTA TCCGTGAGGA CGACACCGTG
TTCTCGGCGG CCAAACTGTT CTTTGCCTAT GGGTTGGGCA ACGCGCTGAC GTTTCCGCTG
GCCGTGGGCG CCACCACGAT CCTGATGGCC GAACGGCCAA CCCCGCAGGC CGTGTTCCAG
CGGCTGACCA CCCATCGTCC CACCGTGTTC TGTGGGGTGC CCACGCTGTT CGCCGGTATG
CTCGCCTCGC CAGATTTGCC GCCGCGCGCC GATGTGGCGA TGCGTGTGTG CACGTCAGCA
GGCGAGGCGT TGCCCCAGGA CATCGGCAAC CGCTTCCTCG CGCATTTTGG GTGCGACATC
CTCGACGGTA TTGGTTCCAC CGAGATGCTG CACATCTTCT TGTCGAACCG GCCAGGCGAG
GTGCGCTATG GCACCACGGG CAAGCCGGTG CCGGGCTACG AACTGAAACT GCTCGACGAG
CGAGGCGAGC CCTGCGCGTC CGGCGAAGTT GGGGATCTCT ATATCAAAGG CCCATCGGCC
GCGCTGATGT ACTGGTGCAA TCGCGAAAAG AGCCGCGACA CGTTCGTTGG CGCCTGGACG
CGCAGCGGTG ACAAGTACGT GTGCGATGCC GACGGCTATT TCACCTACGC GGGCCGCAGC
GACGACATGC TCAAGGTCGG CGGCATCTAC GTTTCGCCAT TCGAAGTGGA GGCTGCGCTG
GCTCTGCACC CGGCGGTGCT CGAGGCCGCG GTGATCGGCG TGGCCGATGC GGACGACCTG
ATCAAACCGA AGGCGTTCGT GGTGATGCGG CCGGGCCAGC AATGGCACGA AGGGATGGCC
GCGGAACTGC AGGCGTTCGT GAAGTCCCGC CTCGCGCCGT ACAAGTATCC GCGGCAGATC
GAATGCGTCG AAGAATTGCC CAAGACCGCT ACTGGCAAGA TCCAGCGTTT CCGGCTGCGC
CAGCGCGAGG AAGCCGCACG GCAGCACTGA
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| Protein sequence | MTPPISSAGQ AGCATASTDP RAETAIAALP PRYNAAEDLL TRNLVAGRGV RTAYIDDAGS
LTFAELDDRC RRFAGALLRA GFRREERVLL CAFDTIDFPT VFLGCLLAGV VPVAVNTLLT
TEDYAYMLEH SGARAVVVSA QLLPTMRAAM TKAGVTPDLI VAAPHTEDSA KAANTVSAMA
ASAPPLAQSV ATGPDDMAFW LYSSGSTGRP KGTVHTHGNL FHTADLYARR VLGIREDDTV
FSAAKLFFAY GLGNALTFPL AVGATTILMA ERPTPQAVFQ RLTTHRPTVF CGVPTLFAGM
LASPDLPPRA DVAMRVCTSA GEALPQDIGN RFLAHFGCDI LDGIGSTEML HIFLSNRPGE
VRYGTTGKPV PGYELKLLDE RGEPCASGEV GDLYIKGPSA ALMYWCNREK SRDTFVGAWT
RSGDKYVCDA DGYFTYAGRS DDMLKVGGIY VSPFEVEAAL ALHPAVLEAA VIGVADADDL
IKPKAFVVMR PGQQWHEGMA AELQAFVKSR LAPYKYPRQI ECVEELPKTA TGKIQRFRLR
QREEAARQH
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