| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1223 |
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| Symbol | |
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| ID | 4038026 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 1342404 |
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| End bp | 1343354 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637976610 |
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| Product | anaerobic benzoate catabolism transcriptional regulator |
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| Protein accession | YP_583378 |
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| Protein GI | 94310168 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0703] Shikimate kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.117145 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0124179 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCGCG ACCCTGATCC GCTTATGACC GCCGAAGGCC GCCCGGACAA CCGCGCGACC
GGTGAACGGG ACCCGTATCT CACGCATCTG GGCGAGCGCA TCCGCTCACT GCGCGCGGCA
CGCGGCATGT CGCGCAAGGA TCTGGCGCGC GGCGCGGACG TATCGGAGCG CTATCTCGCC
AATCTCGAAA CCGGCACCGG CAATGCATCG GTGCTGCTGC TGCGGCAGGT CGCCAACGCG
CTGGACGTGC CACTGCCCGT GGTGCTGGCG GAGGTTGACG GCCATGCCGA TGCGGGCGGC
GCGGGCAACC CTCGCGCCAC AGAGTTCTCG CAACTGATTC AGTGGCTCGC ACAACTGCCG
GCGAGCGATC TGGCCCGCGT GCGGGAAGCC GCGCGGCACG CGCTGTCGCC AACGGAATCC
CGTGACGCCC GCCATCGCCG TATCGCGCTG ATCGGCCTGC GCGGCGCGGG CAAATCGACG
CTGGGCCGCG CGCTCGCGGC CGCGGAGGAC ATGCCGTTCG TCGAACTGAA CGCCGCCATC
GAAAGGGAGG CCGGCGCCAG CCTTTCCGAG ATCCATTCGC TGTACGGCCA GGCCGCGTAT
CGCCGCTACG AAATGCGCGC GCTGGAGCGC GTGCTGCGCG AGAACGACAC CATGGTGCTG
GCCACGCCGG GCAGCCTGGT CTCCGAACCC GCCACGTTCA ACCTGCTGCT ATCGCGATGC
TTCACGATCT GGGTGCGCAC GTCACCCGAG GAACACATGG CGCGCGTGGT GGCCCAAGGC
GACATGCGAC CGATGGAAGG CAACCGCGAG GCGATGACTG ACCTGCGGCG CATCCTGCAA
GCCCGCACGC CACTCTATTC GCGCGCGGAC GCCACGATCG ACACGAGCGG CCAGGATGCC
GCCACGTCAC TGCACGCGCT GCAGGCGCAG ATCCTGCACA CACGGGCCTG A
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| Protein sequence | MRRDPDPLMT AEGRPDNRAT GERDPYLTHL GERIRSLRAA RGMSRKDLAR GADVSERYLA
NLETGTGNAS VLLLRQVANA LDVPLPVVLA EVDGHADAGG AGNPRATEFS QLIQWLAQLP
ASDLARVREA ARHALSPTES RDARHRRIAL IGLRGAGKST LGRALAAAED MPFVELNAAI
EREAGASLSE IHSLYGQAAY RRYEMRALER VLRENDTMVL ATPGSLVSEP ATFNLLLSRC
FTIWVRTSPE EHMARVVAQG DMRPMEGNRE AMTDLRRILQ ARTPLYSRAD ATIDTSGQDA
ATSLHALQAQ ILHTRA
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