Gene Rmet_1218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1218 
Symbol 
ID4038021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1336648 
End bp1337310 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content68% 
IMG OID637976605 
Producthypothetical protein 
Protein accessionYP_583373 
Protein GI94310163 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.210535 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0246651 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCTGG TCGATACACT CGAGGAGCAG GCCGTGCTGG AGGCCGTCCT CGACGCCGGC 
AAGCCCGTCG TGCCACTCGA TGCGCGGCAT CTGCACTATC TGATCTACAC GCCGTTCCGC
TACCCGCCCG CCGCCGAGGG CTCACGCTTT CGCGGCCCCC AGGACATCGG TGTGTTCTAT
GGCGCCGAAG CCATTCGCAC AGCCTGCGCA GAGCTTGGAT TCTGGCGCTG GCGGTTCCTG
CAGGACAGCC CGGCGCTGCC GCGCATCGAT GCACGCGCGC AGACCCTGTT CCAGGTCAGC
GTGAAGACCG ACGGGGTGGC ACTCGATACG CCGCCGTTTG TGGACGACGG CGCGCGCTGG
ACCGACCCCA ACCAGCACGA TGAATGTCAG GCGTTCGGGC GCACCGCGCG CGAGGCAGCC
ATCGGCCTGA TCCGGTACAC ATCGGCGCGT GACCCCGTGC ACGGCGCTTG CGCTGCCATC
CTCACCCCCC GCGCCTTTGA CGCGCCCGAG CCGCTCGCCA CCACCACCTG GATGCTGACC
GTACGCCGCG ACCGCGTGAT GTGGCAACGC GACGACCTGC AGCAGCGCGA CAGTTTCGAG
TTCGAAGGCG CCTGGTGGGA CGCCCTACGG CAGCGCACAA GCGAAAGTCC TTCCACGCCC
TGA
 
Protein sequence
MPLVDTLEEQ AVLEAVLDAG KPVVPLDARH LHYLIYTPFR YPPAAEGSRF RGPQDIGVFY 
GAEAIRTACA ELGFWRWRFL QDSPALPRID ARAQTLFQVS VKTDGVALDT PPFVDDGARW
TDPNQHDECQ AFGRTAREAA IGLIRYTSAR DPVHGACAAI LTPRAFDAPE PLATTTWMLT
VRRDRVMWQR DDLQQRDSFE FEGAWWDALR QRTSESPSTP