| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_1195 |
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| Symbol | |
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| ID | 4037997 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | - |
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| Start bp | 1309429 |
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| End bp | 1312041 |
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| Gene Length | 2613 bp |
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| Protein Length | 870 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637976581 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_583350 |
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| Protein GI | 94310140 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.98844 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.84656 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGTTTC TCAAACGAAT TCTCTCCGGC CTGCGCACGG CCATTCTGCC TCCGAACCCT
GCCGGCGCCG TCAGCGATGC CCCTCACGGG GTAGTCCATG CCGACCGTAG CAACGGTGCC
AACGCTCATG GCACCCCCCA GGTCGAGGCA CAAGACAGCA CCGATGGCAC GGACGGCGGC
ACGCCGCTGG CCGCCGCCCC CCGCCGCCTC TGGATCACGC GCTGGCGCAA TCTCGTCGCT
ACGAGCTGGT TCATGTTCAT CCCGCTCGTG GCCATCGTGC TGTTCACGGT AGCGATGGGC
GTCATCCTCT GGTCGCTCCA CGAAACCGAG CACCAGCAGC AGCGCGACGC GCTGTACCGC
GACGCCGCCT GGGCGCAGCA GCGCGTGCGC CTGTCCCTGC TGAGCAACCA GGACCAGTTG
GCCTCGCTGG CGCGGGATAT CGCGGCCGCG CAGCTCGACC AGGGCGCCTA CCGGACGGCC
GCACAGGAAA TCCTGCGCGA GAACCCGGAG ATCGTCTTCA TCAACTGGCT CGACGCCACG
CGGCGCGGCC GCTGGTCGCT GCCATCGACG TCGGAATTCG CCGCCCGCCT GCGCGAAACC
GCCGATCAGC CGCTCGAGCC CGAGGTCCTG GACACGTTCG ACGCCGCGCG CGAGACCCAG
CGTGTGGTCT ATTCCCGGCC GCTGATGAAC GATCGCGGCG ACAGCTTCAT GCTGATGGAA
GTGCCGATCG TGCGCGATAA CGAGTTCCTG GGCACGCTGG GCGCGCTCTA CTCGATCAAC
GGCATCCTGA CGCACCTGCT GCCACCGGAA CTGACCGAGC GTTACCGCTT CTCGCTGATC
GACAAGAACA ACCAGACCCG GGCCAGCACC TCGGTACGGC CGGTACCGGG CAATGCGCTG
TCCTACGAGG TCCTGCTCGA CCCGCCGGGC CATTCGCTGT CCCTGCGCGC CGACGCCTAC
CCACCGCCCT CGAACCTGCC CAACAACATG TTGCTGTGGC TGGTGGTGGG CCTGTCGTGC
TTCCTGCTGT GGAGTCTGTG GAGCATGTGG CGCCATACCA GCCGCCGCTC CGAAGCCCAG
CGCGCCCTGC TGGCCGAAAC CTCGTTCCGT CGCGCGATGG AAAACTCGAT GCTGATCGGG
CTGCGGGCAC TGGACCTGAA CGGGCGAATC ACCTACGTGA ATCCCGCGTT CTGCCGCATG
ACCGGCTGGA CCGAGAACGA TCTGGTCGGC CGCGTGCCGC CCTTCCCGTA CTGGCCGCCC
AATGACCAGC AGGAGATGCA GAAGCAGATC GACCTGACGC TGCAGGGCAA GTCGCCGGCC
ACCGGCTATG AAATGCGCGT CATGCGCCGT GACGGCAGCA GCTTCTTCGC CCGCATGTAC
GTATCGCCGC TGGTAGACGG CCGTGGCCGC CATACGGGCT GGATGAGCTC GATGACGGAC
ATCACCGAGC CGAAGCGCGC CCGCGAGGAA CTCGCCGCCG CGCACGACCG CTTCACGACG
GTGCTGGAAA GCCTGGACGC GGCTGTATCT GTGCTGGCCA CGGACAAGGC CGAGTTGCTG
TTCGCCAACC GCTACTATCG GCAGCTCTTC GGCTGGGAAG CCGAGGGCCA CCTGAAGCTG
GCCGGGGACG ACTTCGACAA GGACCAGATG TCGAGCGACA ACACCGACTT CGTCGATGCC
TATGCCGGCC TGCCCGCCTC GGAACTGATG CCGTACGCGT CCGACGCCCG CGAGGTGTTC
GTGCCGGACA TGCAGAAATG GTTTGAAGTG CGCCGCCGCT ATATCCAGTG GGTGGACGGC
CACCTCGCGC AGATGCAGAT CGCCACCGAC ATCACGGTGC GCAAGGCAGC CGAGGAAATG
GCGCGCCAGC ACGAGGAACG CCTGCAGTTC ACGAGCCGCC TGACCACAAT GGGCGAGATG
GCGTCGTCGC TGGCGCACGA GCTGAACCAG CCGCTGGCGG CCATCAACAA CTACTGCATG
GGCGCCGTGG CTCGCCTGCA TTCGGGCCGG AGCACGCCGG AAGACCTGAT CCCGGTGCTG
GAAAAGACCT CGGCACAGGC AGTGCGCGCG GGCACGATCA TCAGCCGCAT TCGCGGTTTC
GTGAAGCGTA GCCAGCCGCA GCGGCGCGAA GCCTCGCTGC ACGACATCGT GGCCGATGCC
GTCGGCCTGG CCGACCTGGA GGCCGCGCGG CGCCGCGTCA CGATCCTGAC CCGCCTGCCG
ACCCCGCCGC TGATGCTCTA CGTGGACCCG GTGCTGATCG AGCAGGTACT GGTCAACCTG
CTCAAGAATG CCGTGGAAGC GATGGCCGGC ATGCCGGCCC TGCGCGCCGC GGGCGTGGTA
CGGTTGCACG CGCGCGTAGA AAACGTCGAA TTTGGCCAGA GCGTCTGTAT CGACGTGATC
GACCAGGGCC CCGGCGTGGA CGAAGCCACC AAGGAGCGCC TGTTCGAGCC GTTCTTCAGC
ACCAAAGCGG ACGGCATGGG CATGGGCCTG AATATCTGCC GTTCGATCAT CGAATCCCAT
CAAGGCCGTC TGTGGGTAGA AAACAATGTG GACGGCATCG GCTGTACGTT TAAAATCACC
CTGCCGCTGC AGCCTGCGCT ACCCGAACAG TAA
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| Protein sequence | MQFLKRILSG LRTAILPPNP AGAVSDAPHG VVHADRSNGA NAHGTPQVEA QDSTDGTDGG
TPLAAAPRRL WITRWRNLVA TSWFMFIPLV AIVLFTVAMG VILWSLHETE HQQQRDALYR
DAAWAQQRVR LSLLSNQDQL ASLARDIAAA QLDQGAYRTA AQEILRENPE IVFINWLDAT
RRGRWSLPST SEFAARLRET ADQPLEPEVL DTFDAARETQ RVVYSRPLMN DRGDSFMLME
VPIVRDNEFL GTLGALYSIN GILTHLLPPE LTERYRFSLI DKNNQTRAST SVRPVPGNAL
SYEVLLDPPG HSLSLRADAY PPPSNLPNNM LLWLVVGLSC FLLWSLWSMW RHTSRRSEAQ
RALLAETSFR RAMENSMLIG LRALDLNGRI TYVNPAFCRM TGWTENDLVG RVPPFPYWPP
NDQQEMQKQI DLTLQGKSPA TGYEMRVMRR DGSSFFARMY VSPLVDGRGR HTGWMSSMTD
ITEPKRAREE LAAAHDRFTT VLESLDAAVS VLATDKAELL FANRYYRQLF GWEAEGHLKL
AGDDFDKDQM SSDNTDFVDA YAGLPASELM PYASDAREVF VPDMQKWFEV RRRYIQWVDG
HLAQMQIATD ITVRKAAEEM ARQHEERLQF TSRLTTMGEM ASSLAHELNQ PLAAINNYCM
GAVARLHSGR STPEDLIPVL EKTSAQAVRA GTIISRIRGF VKRSQPQRRE ASLHDIVADA
VGLADLEAAR RRVTILTRLP TPPLMLYVDP VLIEQVLVNL LKNAVEAMAG MPALRAAGVV
RLHARVENVE FGQSVCIDVI DQGPGVDEAT KERLFEPFFS TKADGMGMGL NICRSIIESH
QGRLWVENNV DGIGCTFKIT LPLQPALPEQ
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