Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_1141 |
Symbol | |
ID | 4037939 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 1248642 |
End bp | 1249343 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637976523 |
Product | GntR family transcriptional regulator |
Protein accession | YP_583296 |
Protein GI | 94310086 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.536549 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCGTC TCTCCCGCCC CGCCTCCCTC GCCAGCCGCA TCGCCCAGGC CCTGCGCGAC GATATCGCCG CCGGACGCTT TGCGGCTGGC GCCCGGTTGC CGGCCGAGGC CACGCTGGCG GAGACGTTCG ATGTAAGCCG GCCGATCGTG CGCGAAGCCA TCGCCCTGCT GAAGGCCGAC GGGATACTGG TCACTCGCAA GGGGTCCGGC GCCTATGTCT CGGAGACACC AGGCGGGCAA GTCTGGCGCG TAGCCAGCGC CCCGGACGGT GGTCCGACGC TGGCTCAGCT ATTCGAATTA CGGCGCGTAG TGGAAACCGC GTGCGCCGAA ATGGCGGCCG CACGCCGCAC CGATGTCGAT CTGGTCGCGA TCCGTGCCGC ACTGGCCACG ATGCAGACCC ACGCCACAGA CTTCCCGAGC GCGGCTGCCG CCGACATTGC GTTCCACCAC GCAATTGCCC AGGCCGCCCA CAACCCCTGC TTTACCGGGC TAACGGATTT TGTCAGCCAG CAATTGCTCG TGGCGCGCCA GCACGCCTGG GAGAACAGCG CCCGCCTCGG CACGTTGCAT GGCACACCAC GCGCCGCCGA CGCCGAACAT GCGGCCCTGG TCGAGGCCAT CGCGGCCGGC GACCCCTCGA CGGCCCGTGC GGCGGCCACC GCCCACCTGT CCGCCGCCGC TGCGCGGATG GGCCTCGACT GA
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Protein sequence | MNRLSRPASL ASRIAQALRD DIAAGRFAAG ARLPAEATLA ETFDVSRPIV REAIALLKAD GILVTRKGSG AYVSETPGGQ VWRVASAPDG GPTLAQLFEL RRVVETACAE MAAARRTDVD LVAIRAALAT MQTHATDFPS AAAADIAFHH AIAQAAHNPC FTGLTDFVSQ QLLVARQHAW ENSARLGTLH GTPRAADAEH AALVEAIAAG DPSTARAAAT AHLSAAAARM GLD
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