Gene Rmet_1046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_1046 
Symbol 
ID4037843 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp1139122 
End bp1139637 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content66% 
IMG OID637976427 
Productgluconate kinase 
Protein accessionYP_583201 
Protein GI94309991 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3265] Gluconate kinase 
TIGRFAM ID[TIGR01313] carbohydrate kinase, thermoresistant glucokinase family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.000585509 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.104537 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTATA TCCTGATGGG CGTTTCCGGC AGCGGCAAGA GCACGGTCGG CCAGATGCTG 
GCGGACCGTC TTCATTGCGG TTTCCACGAC GCGGACAGCT TCCACAGCGA CGCCAACAAG
GCCAAGATGC ACGCCGGCAT CCCATTGACC GATGACGACC GCTGGCCCTG GCTGGACGCG
ATGCGGGCCG CCATCGACGC CGCCCGCGCC GAGGGCCGCA CCCACGTGTT CACATGTTCG
GCGCTGCGCC AGGTCTATCG GGACCGCCTG CTGCCGGCCG ACGGCGGCGT GACCTTCGTG
TTCATGAAGG GCGACGCCTC GACGATCGGC AGCCGCCTGT CCGCGCGCAC CGACCATTTT
TTCAATCCCG CGCTGCTCCA GAGCCAGTTC GAGACCCTGG AGGAGCCTTG CGACGCGCTC
GTGCTCGATA TTCGCCGCAC TCCCGAGGCA CTGGTCGAGG ATATTCTGGA AAAATGCCCG
CCGGCATCGG CCGCCTGTTC CGGGAAGGCG CCCTGA
 
Protein sequence
MIYILMGVSG SGKSTVGQML ADRLHCGFHD ADSFHSDANK AKMHAGIPLT DDDRWPWLDA 
MRAAIDAARA EGRTHVFTCS ALRQVYRDRL LPADGGVTFV FMKGDASTIG SRLSARTDHF
FNPALLQSQF ETLEEPCDAL VLDIRRTPEA LVEDILEKCP PASAACSGKA P