Gene Rmet_0906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0906 
Symbol 
ID4037702 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp992946 
End bp993980 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content70% 
IMG OID637976286 
ProductPGAP1-like protein 
Protein accessionYP_583061 
Protein GI94309851 
COG category[R] General function prediction only 
COG ID[COG1075] Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTGA CGGCCGCCGC GCTGCGCCGC ATCGCTGTCG TCGTGCAGGC GGCAGCAGTC 
GGCGGGCTCG CGGCGGCACT AGCCGCCGGG GCGGACTGGT CCTGGCCTGC AGCGCTTCTG
GCCAGCATCG CGGGCGCATT GGTCGCCTTC GGCATCGGCG TCGCGATCGC CTTTCTAGTG
ACCCGGGCCG GGCTCGCCAT TCCCGATTCG GCCCGGCCGC AGCGGCCTGA CGACATTCCT
GCCCCAGGGC CGCTGAGCTG GCGCCACGCG ATGTCGTGCT ACCTGGCCGA GTGCCGCGCG
ATCCTGCGGA TGTTCGACTG GTTGCAGCCA TTCCGTTCGC GGCTGACATT CGCGCAGCCA
ACCGATCCGC TACCTGATAC CCCCACTGTG TTACTGGTCC ACGGCTATGG CTGCAATCAC
GCGGTCTGGC TCGACCTGGC TCCTGCGCTC GCCGGCGCCG GCTACCGTTG CGAGGGCATC
GACCTGACGC CGGTGCTCGG CGATATCGAC GACTACGCCG CCGCCCTGCT CGCACGAATG
CGCGACCTCC GTGCGCGCAC CGGCCACCCC CCGCTGTTGG TCTGCCACAG CATGGGCGGG
CTGGCAGCCC GCGCGGCACA GGTAATGGCC GATGCAGCAG GAGAATCCGT GCCATGCGCC
GGCATCGTGA CGCTTGGCAG CCCGCATCGC GGCTGCCCGC TGGCCACCTT CGGCGCTGGA
ACGAACGCCC GTCAGATGCG TTGGGCCAGC CCATGGCTGA CGAACCTGGC CGAGGCGGAG
AGCCCCGCGA TGCGCGGTCG CATGATCTCG GTCTTCAGCT GGCACGACTC GATCGCGGGC
CCCGCCGACA CGGCCTGGCT CGAGGGCGCG CGCCATATCC CATTGAGCGG GATCGGGCAC
GTCTCGCTGC TGCGCGATCC ACGCGCGGTG CAGGCCACGC TGGATGGCCT CGCGACACTG
CGAAAACAAC CCGCTGCGAC ATCGGACTCA GCCCTATCGT TGCCCCACGG AAACGCCTCG
GCAAGGTTCA TGTGA
 
Protein sequence
MSLTAAALRR IAVVVQAAAV GGLAAALAAG ADWSWPAALL ASIAGALVAF GIGVAIAFLV 
TRAGLAIPDS ARPQRPDDIP APGPLSWRHA MSCYLAECRA ILRMFDWLQP FRSRLTFAQP
TDPLPDTPTV LLVHGYGCNH AVWLDLAPAL AGAGYRCEGI DLTPVLGDID DYAAALLARM
RDLRARTGHP PLLVCHSMGG LAARAAQVMA DAAGESVPCA GIVTLGSPHR GCPLATFGAG
TNARQMRWAS PWLTNLAEAE SPAMRGRMIS VFSWHDSIAG PADTAWLEGA RHIPLSGIGH
VSLLRDPRAV QATLDGLATL RKQPAATSDS ALSLPHGNAS ARFM