| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0898 |
|---|
| Symbol | |
|---|
| ID | 4037694 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007973 |
|---|
| Strand | + |
|---|
| Start bp | 985138 |
|---|
| End bp | 987693 |
|---|
| Gene Length | 2556 bp |
|---|
| Protein Length | 851 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637976278 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_583053 |
|---|
| Protein GI | 94309843 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3127] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGCCG AAACGACCGT CAAAGCTTCT CAGCCGCGTT TTTCCGCCTG GCGGCAAGCC
TTGCGCATGG CCCGCCGGGA CTGGCTGGCC GGGGAACTGA CGCTGCTGTT GTTCGCGCTA
GTGCTGGCCG TGGCGGCGCT GACCAGCGTG GGCTTTCTGG CGGACCGGAT GCGTCTGGGC
CTGGAGCGCG ACGCGCGGCA GATGATCGCG GCCGATGTGC TGTTGATTTC CGACCAGCCA
TTCGACGCGG CCTTCGCCGA GCGGGCGCAG CGTGACGGAC TCCGGGTGGC GCAGACCGTC
ACGTTCCCGA GCATGGCAAC GGCGCGCGTG AGAGGCGCGC CCGAGCATGC CGAAGCACCG
AGCCAGCTGG CGGCGCTGAA GGCGGTGACC GACGACTATC CGCTGCGCGG CCGGCTCAAG
GTGGCCAGTG CCCCGGGCGG CGCCGAGACG GTGGCGGAGG GCATTCCCGC CCCGGGCAAG
GTGTGGGTCG ACGAAGCGCT GCTGATCGCG CTAGGCCTGC ATGTTGGCGA CAGCCTGCAA
CTCGGCAGCA AGACGTTTTA TATCGACCGG ATTCTCACGC AGGAACTCGA TCGTGGCGCG
GGCTTCATGA ACTTCGCGCC GCGTGTGTTG TTGCCGCTGT CCGACCTTGA TGCGACGAAG
CTGATCGGCT GGGGCAGCCG TGTGACATAC CGCTTGCTCG TTGCGGGCTC CGATGTGGCA
GGCGAGGAGT ATCGGAAGTG GGCAACCGAC GAAATCCAGC GCCGGCATCT GCGCAATACG
CGCGTGGAGT CTCTGGAATC GGGACAGCCG CAGATGCGTG CCACGCTTGA TCGCGCCGAG
CGCTTCCTGT CGCTGGTGGC GGTGCTGTCG GCGATGATCG CGGCAGTGGC CATCGCGATG
TCCGCCCGCC GCTACATGCA GCGCCACACC GATGCCTGCG CGGTCTACAA GTGCCTGGGC
CTGTCACGCC AGCAGATCCT GACCGCTTTC GCGATCGAAT TCGCGCTGCT CGGCCTCGGT
GGCGCGGTGG TGGGCGTGGT GCTGGGCTAT CTGGCGCACT ATGGATTGCT GATGTCGCTC
GGTGGGCTGC TGCAGGTGTC GTTGCCGCAT CCGTCGGCGG TGCCCGCGCT GATCGGCGTG
GCCGCGGGGC TGGTACTGCT GGTGGGCTTT GCATTGCCGC CGCTGCTGGC GCTGACGCGT
GTGGCGCCAC TGCGTGTGCT GCGACGCGAT ATCGGCGTGC CTCCCGTGTC CGTCTGGGTG
GCCTATGCGC TCGGGCTCGG TGCTTTCGTG GCGCTGCTGC TGGTGGCGGC GCGTGACCTG
AAGCTCGGGG TGACCACGGC TGGTGGGTTT GTTGGCGCGG GTATCGCGTT TGCGGTGCTG
GCGCTGGGTC TGTTGCTCCT GCTATCTCGT GTGATGCGTG GCCGCGCGCG TGGCAATGTC
GGCTGGCGCT TCGCGCTGGC CGTGCTCGAA CGCCGCCGTG GCGTCACTGT GCTGCAGACC
GTCGCGCTTG CCGTCGGGCT GATGGCGCTG TTGTTGCTGG GTATGACGCG CAACGACCTG
ATCGATTCTT GGCGCAACGC CACGCCGGCC AATGCGCCGA ATCGCTTCAT CATCAATATC
CAGCCGGATC AGCGCGATCC GCTGCAGGCG ATGCTGGCAA AGGATGGCGT GGAAGATCTG
CTCTATCCGA TGGTGCGCGG CCGCCTGACG CAGATCGGCA GCCGGCCGGT CCAGGCCGAG
AGCTACCCGG AGGGACGCGC GCGCAATCTG GTGGAGCGCG AGTTCAACCT GTCGTACATG
GACCAGCTTC CCGAAGGCAA TCAAGTCACC TCGGGCCGCT GGGACGAAGG TGGCGCGTCG
GTGGAAGAGG GCATCGCCAA GACGCTACAT ATCCAGCTTG GCGACACGTT GCGGTTCGAC
GTGGCCGGAC AGACCGTCGA GGCACCCGTC ACGTCGCTGC GTAAGCTCGA CTGGGGCTCG
ATGCGCGTGA ATTTCTTCGT GATTCTGCCG ACGGCCAAGA TGCAGGGTCT GCCCGAGACC
TACATCACCG CGTTCCATCT GCCGCCCGCC AAGGCCGCGC TTGGCAATCA GCTTGCCGCT
GCATTCCCGA ACATCACAGT GGTGAACACC GACTTGATCC TGCGGCAGAT CCAGCAGGTT
CTGGACCAGG TAATCGCCGC CGTGGAGTTT CTGTTCGTCT TCACGCTGCT GGCCGGCGTG
ACCGTGCTCT ATGCGGCGCT ATCCGGCGCG CGTGACGAGC GCAAGCGCGA TGCCGGGCTA
CTCAAGGCGC TGGGTGCGTC GGCGGCGCTG GTACGACAGA CCCAGTACGC GGAATTCCTC
GTGGTCGGCG GACTGGCGGG GCTGCTGGCC AGCGTCGGCG CTATCGGGGT GGGTTGGGGC
CTGTCGCAGT ACGTGTTCGA TTTCCCGTAC CGATTCAACA TCTGGATCGT ACCGGTCGGC
GTGGTTTCTG GCATGATCTG CGCTTTTGCG GGCGGCTGGC TCGGATTGCG CGAGGTATTG
CGGCAACCGG CGCTGGCGAC GCTGCGCGAC GTCTGA
|
|---|
| Protein sequence | MSAETTVKAS QPRFSAWRQA LRMARRDWLA GELTLLLFAL VLAVAALTSV GFLADRMRLG
LERDARQMIA ADVLLISDQP FDAAFAERAQ RDGLRVAQTV TFPSMATARV RGAPEHAEAP
SQLAALKAVT DDYPLRGRLK VASAPGGAET VAEGIPAPGK VWVDEALLIA LGLHVGDSLQ
LGSKTFYIDR ILTQELDRGA GFMNFAPRVL LPLSDLDATK LIGWGSRVTY RLLVAGSDVA
GEEYRKWATD EIQRRHLRNT RVESLESGQP QMRATLDRAE RFLSLVAVLS AMIAAVAIAM
SARRYMQRHT DACAVYKCLG LSRQQILTAF AIEFALLGLG GAVVGVVLGY LAHYGLLMSL
GGLLQVSLPH PSAVPALIGV AAGLVLLVGF ALPPLLALTR VAPLRVLRRD IGVPPVSVWV
AYALGLGAFV ALLLVAARDL KLGVTTAGGF VGAGIAFAVL ALGLLLLLSR VMRGRARGNV
GWRFALAVLE RRRGVTVLQT VALAVGLMAL LLLGMTRNDL IDSWRNATPA NAPNRFIINI
QPDQRDPLQA MLAKDGVEDL LYPMVRGRLT QIGSRPVQAE SYPEGRARNL VEREFNLSYM
DQLPEGNQVT SGRWDEGGAS VEEGIAKTLH IQLGDTLRFD VAGQTVEAPV TSLRKLDWGS
MRVNFFVILP TAKMQGLPET YITAFHLPPA KAALGNQLAA AFPNITVVNT DLILRQIQQV
LDQVIAAVEF LFVFTLLAGV TVLYAALSGA RDERKRDAGL LKALGASAAL VRQTQYAEFL
VVGGLAGLLA SVGAIGVGWG LSQYVFDFPY RFNIWIVPVG VVSGMICAFA GGWLGLREVL
RQPALATLRD V
|
|---|
| |