Gene Rmet_0840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0840 
Symbol 
ID4037631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp919278 
End bp920093 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content65% 
IMG OID637976216 
ProductIclR family transcriptional regulator 
Protein accessionYP_582995 
Protein GI94309785 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0889831 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACCA AGAAAACCCG GAGTACGAGC GAGGGAGAGA CAGAAATGCG CGATGAGGCG 
GTGGGAAGGA AGACCGCGGG CGCGCAAACA TTGCGCCGGG GGCTGGAAAT CCTGAGGCTG
CTGGCCCGCC ATCAGGAAGA AGGCGCGACG CTGGCGGATA TCGTCACGGA AAGCGGCCTG
GAGCGGCCGA CGGCATATCG GCTGCTCTGC TCGCTCGAGG AGGAACGCTT CGTCGAGCGC
AACATCCACA GCAAGCGCTA CCGGCTCGGC ATCGACGCTA TGCAGCTTGG CGCCGCCGCC
GCGGAGAAGG CGCCAATCGT CGATCTGGTC GCGCCTCTGA TGAAAAAGCT GGCTCGCGTG
TCGGGCGACA CGGTCTTCCT GGTGGTGCCA CAAGGAGACT TCACGGTCTG CCTGCACCGC
GAGGAAGGGC CGTTCCCCGT GCGCGTGTTC ACGACGGTGC CGGGCCAACG CCGGCTACTG
GGCATCGGCG CTGGCGGCCT CGCGCTGATG TCGGCAATGT CGGACGACGC GATCCGCGAG
GTTCACAAGC GCAAGCACGC ACTTTATGCC GAAGCCGGAA TGCCGATCTC GCGACTACTG
GCGGCGGCAG CCAGAAGCCG ACGCAAGGGC TATGCGGAGA TCGTGGATAC CATCACCGAA
GGCGTCTCCG GCGTGGGATG CGCGTTCCAG TTGCCGTTTG GCGCGTCGGC GGCCATCAGC
TTCGGCGCGA TCAGCAGCCG CATGAACGCA AGCCGCCGAG ACGAACTCGG CGCGTTGATG
GTGCGGGAGC TATCGACGAT GAACCCGGCT GGATAG
 
Protein sequence
MDTKKTRSTS EGETEMRDEA VGRKTAGAQT LRRGLEILRL LARHQEEGAT LADIVTESGL 
ERPTAYRLLC SLEEERFVER NIHSKRYRLG IDAMQLGAAA AEKAPIVDLV APLMKKLARV
SGDTVFLVVP QGDFTVCLHR EEGPFPVRVF TTVPGQRRLL GIGAGGLALM SAMSDDAIRE
VHKRKHALYA EAGMPISRLL AAAARSRRKG YAEIVDTITE GVSGVGCAFQ LPFGASAAIS
FGAISSRMNA SRRDELGALM VRELSTMNPA G