Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_0712 |
Symbol | |
ID | 4037503 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | - |
Start bp | 787434 |
End bp | 788087 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637976088 |
Product | OmpA/MotB |
Protein accession | YP_582867 |
Protein GI | 94309657 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0107689 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAT TTGCCAAGCT CGCGCTCGTT GCAGCTACCG CAGTAATGGC TGCATCCGCT CAAGCCCAGT CCGTCCCCTA TGAAAAGAAG GCAGTGAACG ACAACTGGGG CAACGGTACG AGCGAGTACG TGTGGAAGAA TGGCACGAAC GAGCTCTGCT GGCGCGACAG CTCCTGGACC CCGGCAACGG CCAATGCACA GTGCGATGGC GCGCTGGCTC CGGCTGCTGC GGCTCCGGCC CCGACCCCGG TGGCACCGCC GGTAGTGTCG AGCGAGAAGG TCACTTTCGC TGCTGACACC CTGTTCGACT TCGACAAGGC TGTTCTGAAG CCCGAAGGCA AGGCCAAGCT GGACGACCTG GTTTCGAAGC TGCAAGGCAT CACCCTGGAA GTGATCATCG CTGTTGGTCA CACCGATTCG TTCGGTTCGG ACAAGTACAA CGATCGCCTG TCGATCCGTC GTGCTGAGTC GGTCAAGGCC TACCTGGTGA GCAAGGGCGT TGAAGCCAAC CGCGTGTACA CCGAAGGCAA GGGCAAGCGT CAGCTGAAGG TTGATCCGAA GTCGTGCAAG GGCAACCGCA CTGCTCAGAT CGCCTGCCAG CAGCCGAACC GTCGCGTGGA AGTCGAAGTG GTCGGCACCC GCAGCGCACG TTAA
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Protein sequence | MKKFAKLALV AATAVMAASA QAQSVPYEKK AVNDNWGNGT SEYVWKNGTN ELCWRDSSWT PATANAQCDG ALAPAAAAPA PTPVAPPVVS SEKVTFAADT LFDFDKAVLK PEGKAKLDDL VSKLQGITLE VIIAVGHTDS FGSDKYNDRL SIRRAESVKA YLVSKGVEAN RVYTEGKGKR QLKVDPKSCK GNRTAQIACQ QPNRRVEVEV VGTRSAR
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