Gene Rmet_0682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0682 
Symbol 
ID4037471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp754836 
End bp755483 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content65% 
IMG OID637976057 
Producthypothetical protein 
Protein accessionYP_582837 
Protein GI94309627 
COG category[S] Function unknown 
COG ID[COG2860] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.00825878 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.45862 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATATC ACCTGCCGTT CGATTTGCTG ATGGGGCGAC TGCCCCTGAT CCTGCACGTG 
ATGGAAGTGA TCGGCGTGCT GGCGTTCGCC GTCTCCGGCG TGGTCGATGC CCGCAAGCAG
CGGCTGGATG TGGTCGGCAC CTTCGTCGTC GCGTTCGCCA CGGCATTTGG CGGCGGCACC
TTGCGCGACG TGTTGCTCGA CCGCCGGCCC TTCTACTGGG TGGATCACGA GTACTACGTC
CTGCTGATCT TCGTGATGTC GTTGGGCGCG TCTTTCGTTC TGCGCGTGGC TAGCCGGGTG
GCGTCGGACC GCACCATGCT GGTGGCCGAC GCGATCGGGC TCGGATTGTT CTCGGTCACT
GGCACGTCGC TGGCGCTGGT AGCGCAGATG ACGCCGACCG TAGCGGTGAT GATGGGCATC
ATCTCGGCGG TGTTCGGCGG CGTGGTGCGT GACGTGCTCT GCAACGAGGT GCCGATGATC
CTGCGCGATC GCTCGCCGTA TGCCACCTGT TCGTTCGTCG GCTGCTGGAT CTACGTGGGG
CTGACCTGGC TGCGTGCCGA CCAGGAGGTG GCGCTGCTGG CCGGCGCGCT GGTCACGATG
GGAATGCGGC TGGTGTCGGT GCAGTTTGGC TGGAAGCTGC CGAGCTAG
 
Protein sequence
MQYHLPFDLL MGRLPLILHV MEVIGVLAFA VSGVVDARKQ RLDVVGTFVV AFATAFGGGT 
LRDVLLDRRP FYWVDHEYYV LLIFVMSLGA SFVLRVASRV ASDRTMLVAD AIGLGLFSVT
GTSLALVAQM TPTVAVMMGI ISAVFGGVVR DVLCNEVPMI LRDRSPYATC SFVGCWIYVG
LTWLRADQEV ALLAGALVTM GMRLVSVQFG WKLPS