Gene Rmet_0560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0560 
Symbol 
ID4037349 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp598936 
End bp600459 
Gene Length1524 bp 
Protein Length507 aa 
Translation table11 
GC content65% 
IMG OID637975935 
Productanion transporter 
Protein accessionYP_582715 
Protein GI94309505 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0471] Di- and tricarboxylate transporters 
TIGRFAM ID[TIGR00785] anion transporter 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGAAT CACAAGTACC TCCTGCCGCC TCCGGCGCCC CCACCGCCGC GACGGCCGTC 
GCGGCCGCGC CCAAGCTCAA TATCCACTGG GGTCTGTATG CGGCCGTGGT CGTGCTGATC
GCGGTGCTCC TGATACCGAT GCCGGCTGAC CTGCCTGTGG CCGGTCAGCG CATGCTGGCC
ATCCTGGCAT TCGCGGTCGT GGTGTGGATT ACCGAAGCGG TGACCTACGA GACCAGCGCC
ATCATGATCA CGTCGCTGAT GGCCGGCCTG ATCGGCTTCG CGCCGATGGT CAATGACCCC
AACACGCTAT ATGGCACATC GCGCGCGCTT GGCATGGCCC TGGCGGGCTT CTCGAACACC
GCGCTGGCCC TCGTCGCCGC CGCGCTGTTC ATCTCGGCGG CCATGACCGT GACCGGACTG
GACCGGCGCA TCGCGCTGGT CACCTTGTCG GCCATCGGCA CCAGTACCCG ACGCATCCTG
ATCGGCACGA TCGCCGTCAC GATCCTGCTC AGCCTGGTGG TGCCGAGCGC CACCGCGCGC
AGCGCATGTA CCGTGCCGAT CATGATGGGC GTGATCGCCG CATTCGGCGT CGACAAGAAG
TCGAACATCG CAGCCGGCAT CATGATCATG GTCGCGCAAG CCACCAGCGT CTGGAACGTC
GGTATCCAGA CCGCCGCCGC ACAGAACCTG CTGACCGCGG GCTTCATGGA CAAGCTGCTC
GGCGAACGCG TGACCTGGCT GCAATGGCTG ATTGCCGGCG CTCCCTGGGC CATCGTGATG
TCGATCGTGC TGTACTTCCT CGTGCGCTGG CTGCTTCCGC CTGAAACCGA CGCAATTGCG
GGCGGCAAGG AAGCCGTGCA GCGTGAGCTG GCCGCGCTGG GTCCGATGAC GGGCCCGCAG
AAGCGCCTGG CTGCCGTCGC CATCGGCCTG CTGCTGTTCT GGGCCACCGA GGGCAAGCTG
CACAAGTTCG ATACGGCGTC GATCACGTTC GTGGGCCTGG TGATCCTGAT GCTGCCGCGC
ATCGGCGTGA TGGACTGGAA GACGATGCAG CAACGCACGC CATGGGGCAC GCTGATCGTG
TTCGGCGTTG GTATCAGCCT GGGCACCGCG CTGCTGACCA CGCAGGCCGG CCAATGGCTC
GGGAAATTCG TCGTCACGCA TTCCGGCCTG GCCAATCACG GCACGCTGCT GGTCTTTGCC
GTGCTGGCGG CATTCCTGAT CCTGATCCAC CTCGGCTTTG CCAGCGCCAC GGCACTGACC
TCCGCGATGC TGCCGATCCT GATCTCGGTA CTGCAAACCA TACCCGGTGA CATGAACAAG
GTCGGCATGA CGATGCTGCT CGGCTTCACG GTCAGCTTCG GCTTCATCCT GCCCATCAAC
GCACCGCAGA ACATGGTCTG CCTCGGCACC GATACCTTCA ACGGGCGACA GTTCGCGCGC
ATCGGCATCC CGACCACGAT CATCGGGTAT CTGCTGATGC TGCTGTTCGC GTCGACGTAC
TGGCGCTGGC TTGGCTGGAT CTGA
 
Protein sequence
MPESQVPPAA SGAPTAATAV AAAPKLNIHW GLYAAVVVLI AVLLIPMPAD LPVAGQRMLA 
ILAFAVVVWI TEAVTYETSA IMITSLMAGL IGFAPMVNDP NTLYGTSRAL GMALAGFSNT
ALALVAAALF ISAAMTVTGL DRRIALVTLS AIGTSTRRIL IGTIAVTILL SLVVPSATAR
SACTVPIMMG VIAAFGVDKK SNIAAGIMIM VAQATSVWNV GIQTAAAQNL LTAGFMDKLL
GERVTWLQWL IAGAPWAIVM SIVLYFLVRW LLPPETDAIA GGKEAVQREL AALGPMTGPQ
KRLAAVAIGL LLFWATEGKL HKFDTASITF VGLVILMLPR IGVMDWKTMQ QRTPWGTLIV
FGVGISLGTA LLTTQAGQWL GKFVVTHSGL ANHGTLLVFA VLAAFLILIH LGFASATALT
SAMLPILISV LQTIPGDMNK VGMTMLLGFT VSFGFILPIN APQNMVCLGT DTFNGRQFAR
IGIPTTIIGY LLMLLFASTY WRWLGWI