| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_0200 |
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| Symbol | |
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| ID | 4036986 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007973 |
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| Strand | + |
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| Start bp | 208470 |
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| End bp | 209951 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637975573 |
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| Product | isopropylmalate isomerase large subunit |
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| Protein accession | YP_582355 |
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| Protein GI | 94309145 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.637292 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTCCG CGATTAGACT GCGTGCATTC ATTCATTCGA ATTGCATTCA CCCAGCCAAT
GCCATGACCG GTCGCACGCT ATATCAGAAG CTCGTGGACT CGCACACGGT CGTCACGCTC
GATGCGGACA ACGTGCTGCT GTACGCGGAT CTCCACATCA TGAACGAGTA CACGAGTCCG
CAGGCGTTCG CCGGGCTCGC CGAGCAGGGC CGCAAGGTGG CGGCGCCGGG CCAGAACCTG
GCCGTGGTCG ATCACATCAT CCCGACGCAC GCGGAATCCC CGCGCGTGAT CCAGGATCCC
GCCTCGGCGC TGCAGGCTCG CAACCTGAAA CGTAATTGCG ACCTGCACGG TATTCCGCTG
TTCGACACCA ATGATCCGCT GCAGGGTATC GAGCATGTCA TCGCGCCCGA GCACGGCATG
ATCCGGCCCG GCATGGTCGT GCTTTGCGGC GACAGCCATA CCACCACCTA CGGCGCATTC
GGCGCGCTGG GCTTCGGTAT CGGCACCTCC GAGGTGGAGC ACGTGCTGGC CACGCAGACG
CTGGTCTACC GGCTGGCGCG CGACATGCGT ATCCGCGTGG ATGGCCCGCT GCCATCGGGC
ACGACTTCGA AAGACCTGAT CCTCCACATC ATCGCGCGCA TCAGCGCGCA GGGCGCGCGT
GGCTACGCGG TGGAGTTCAC GGGCAGCACG ATCCGTGCGT TGTCGATGGA AGCGCGCATG
ACCCTGTGCA ACATGACCGT GGAGGCGGGC GCGCGCGGGG CACTGATCGC GCCCGATGCC
ACGTCGATCG ACTATGTCCT GCGCCGGGCA CCAGACATCG ACGCCGACAT GGCCGAAACC
GCGCGCCGGG CATGGGCCGG GCTGCGGTCG GATGCCGATG CCGGCTTCGA TCTCGAACTG
GCATTCGATG CCGCTGCGGT GGAGCCGTTC GTCACCTGGG GCACGAGCCC GGATCAGGCG
ATTCCCGTGA GCGCCACGGT GCCGCAGCCG GCCGACGCCG GGGACAGCAA CGCCCGCGTT
TCCGCCGAGC GCGCGCTTGA GTACATCGGC GTGACGCCCG GCGTGTCGCT GCAGGGGCTG
CCTGTGCAGC GGGTGTTTAT CGGCTCCTGC ACGAATGGCC GCATCGAGGA CTTGCGCCAG
GTGGCCGCCG TGGTACGCGG CCGCAGGGTG GCGCCGGGCG TACGTGCAAT GGTGGTGCCG
GGCTCCGGCG CCGTGCGCGA TCAGGCTGAA GCCGAGGGCA TCGCGGCCTT GCTGATCGAT
GCTGGATTCG AATGGCGCAA GCCCGGCTGT TCGATGTGCC TTGCGATGAA CGACGACGTG
TTGGCGCCGG GCGAGCGCTG CGCGTCGACC ACCAACCGAA ACTTCGAGGG CCGCCAGGGC
CGTGCCGGAC GCACGCACCT GATGAGCCCG GCCATGGCAG CCGCCGCAGC CGTTACCGGC
TGTATCACCG ACGTGCGGGA ACTGGAGATC CAACATGGAT GA
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| Protein sequence | MDSAIRLRAF IHSNCIHPAN AMTGRTLYQK LVDSHTVVTL DADNVLLYAD LHIMNEYTSP
QAFAGLAEQG RKVAAPGQNL AVVDHIIPTH AESPRVIQDP ASALQARNLK RNCDLHGIPL
FDTNDPLQGI EHVIAPEHGM IRPGMVVLCG DSHTTTYGAF GALGFGIGTS EVEHVLATQT
LVYRLARDMR IRVDGPLPSG TTSKDLILHI IARISAQGAR GYAVEFTGST IRALSMEARM
TLCNMTVEAG ARGALIAPDA TSIDYVLRRA PDIDADMAET ARRAWAGLRS DADAGFDLEL
AFDAAAVEPF VTWGTSPDQA IPVSATVPQP ADAGDSNARV SAERALEYIG VTPGVSLQGL
PVQRVFIGSC TNGRIEDLRQ VAAVVRGRRV APGVRAMVVP GSGAVRDQAE AEGIAALLID
AGFEWRKPGC SMCLAMNDDV LAPGERCAST TNRNFEGRQG RAGRTHLMSP AMAAAAAVTG
CITDVRELEI QHG
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