Gene Rmet_0171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0171 
Symbol 
ID4036956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp179182 
End bp179529 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content61% 
IMG OID637975543 
Productmembrane hypothetical protein 
Protein accessionYP_582326 
Protein GI94309116 
COG category[S] Function unknown 
COG ID[COG1950] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.186847 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACTGT TGGCCGTATG GATCATCAAT GCCGCAGCGC TGTTCCTGGT GGGCTACCTG 
ATCAGCGGGG TCCATCTTGG CAGCTTCGGC TCCGCCATGA TTGCCGCGCT GGTGCTGGGC
CTCGTCAATG CGCTGATTCG ACCGATCCTC GTCATCCTGA CGCTTCCGGT CACGCTGCTG
ACGCTGGGCC TGTTCATCTT CGTCATCAAC GCGCTGCTGT TCCTGTTCGT GGGCAACCTG
CTGCAGGGAT TCGTCGTGGA CGGTTTTGGT CCGGCGCTGC TTGGCTCGAT CTTGTACAGC
GTGATTGCGT GGATCCTGGC CAGCGTGCTG CTGGGCGAGC GCAACTGA
 
Protein sequence
MRLLAVWIIN AAALFLVGYL ISGVHLGSFG SAMIAALVLG LVNALIRPIL VILTLPVTLL 
TLGLFIFVIN ALLFLFVGNL LQGFVVDGFG PALLGSILYS VIAWILASVL LGERN