Gene Rmet_0063 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0063 
Symbol 
ID4036847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp71065 
End bp72084 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content71% 
IMG OID637975435 
Productallophanate hydrolase subunit 2 
Protein accessionYP_582218 
Protein GI94309008 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1984] Allophanate hydrolase subunit 2 
TIGRFAM ID[TIGR00724] biotin-dependent carboxylase uncharacterized domain 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGAGA TCATTCGGCC TGGCGCGCAG GCATCGGTGC AGGACCTCGG CCGTGTGGGC 
TTCCGCCGCT TCGGCGTGGG CCGCTCGGGC GCGGCTGACG ACCTGGCGCT GCGCGTCGGC
AATCGCCTGC TCGGCAACGA TCCCGGCGCG GCGGCGATCG AGTTCACACT GGGCCGCGCC
GCCGTGCGTT TTGAGGCCGA CATGCGCGTG GCGCTGACGG GCGCCGAATG CAGCGCGAAT
CTTGACGGTG TCCCGGTCTG GTCGTGGCAC GCGTTCGACG TGCGCCGTGG CGAGACGCTC
ACGCTGCCGT CGCCGCGCGG CGGCACGCGC ACCTATCTCT GCGTGGCCGG TGGCATCGAC
GTGCCCCTGG TCATGAATTC GCGTAGCACC GATCTCAAGT CCGGTTTTGG CGGATTCGAA
GGCCGCGTGC TGCGTGAAGG CGATCGCCTG CCCGTGGGCC GGCCCGGCAT CGAGCAGGGG
CAGGACTGGG TGGGCGTGGC CGCGCCGGGT TGGGCGCTGC CCGGGCAAGA CGGTGGCAAT
GCCATCGCAA TCCGCCTGCT GCCCGGCCCC GAATACGCCG ACTTCGAGCC GGCGTCGCAA
GCCGCGCTAT GGCAGTCCGA ATGGACCATC ACGCCGCAGA GCAACCGCAT GGGCCTGCGT
CTGCAAGGTC CCGCATTGGC ACGCCGAGCC GAGCGCTCGG CCGATCTGTT GTCGCACGGC
GTGGTGCCGG GCGTGATGCA GGTGCCGCCG TCAGGCCAGC CTATCGCCCT GATGAGCGAT
GCGCAGACCA CGGGCGGCTA TCCGAAGATC GGCACCGTGA TTGGCGCGGA CCTGTGGCGA
CTGGCGCAGG TGCCGCTGGG CGCGACCGTG CGCTTCCGCC AGGTCACGCT CGAGGAAGCC
GCCGCCGCGC AGGCCGAGGT GGACCGCTAC CTGCGCCAGA TCGACCAGGC ACTGGCATGG
CAGCGCGACG GCATGCAGAT CGCCGCGCGG CGCCGCGCAA CCACGCGCTT TGTCGCCTGA
 
Protein sequence
MIEIIRPGAQ ASVQDLGRVG FRRFGVGRSG AADDLALRVG NRLLGNDPGA AAIEFTLGRA 
AVRFEADMRV ALTGAECSAN LDGVPVWSWH AFDVRRGETL TLPSPRGGTR TYLCVAGGID
VPLVMNSRST DLKSGFGGFE GRVLREGDRL PVGRPGIEQG QDWVGVAAPG WALPGQDGGN
AIAIRLLPGP EYADFEPASQ AALWQSEWTI TPQSNRMGLR LQGPALARRA ERSADLLSHG
VVPGVMQVPP SGQPIALMSD AQTTGGYPKI GTVIGADLWR LAQVPLGATV RFRQVTLEEA
AAAQAEVDRY LRQIDQALAW QRDGMQIAAR RRATTRFVA