Gene Rmet_0027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0027 
Symbol 
ID4036811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp31311 
End bp32078 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content67% 
IMG OID637975399 
Producttwo component transcriptional regulator 
Protein accessionYP_582182 
Protein GI94308972 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones56 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGAATCG CCGCGCTCGA AGACGACCCC GCCCGCGCCA TCGTGCTGGA GCGAGCGTTG 
CATCCCGGCG GACACACGCT TGCGCGATTT CGCAGCAGCC AGCCGATGAT CGAGGCCATG
CGTCGTGAGC CGTTCGATCT GCTGCTGCTG GACCGGGACG TGGCCGGTAC CAACGCCGAT
GATCTGCTCG ATTGGGTGCG GCGCACACTG GGACACGGGA TGCCGGTGAT GATGCTGGGC
CAGAGCGATG CGGAGGAAGT GGTCGTGGGC TGCCTCGCGG CTGGCGCGGA TGCGTACGTG
CCACAGCCCG CGCGATGCGA TGAACTTCGG GCCCGCATCG AGGCATTGAC CCGGCGGGCA
GCGGTGCCCG GCATGACGGT TGCCACCGTG CCGCCCGGCG CGCTAGGGGA CACCTCCGAT
CAACTCGTCT GCGGCGTGTT CCGCTTTGCG GTAGCGGAGC ACCGCGTGTG GGTCAACAGC
ATGACCGTGG CCCTGTCGCC CAAGGAATAC GCGCTGGCGC TGCTGCTGTT CCGCAACCTT
GGCGCGCTGG TGACGCGCCG CGCGATGATC GAGCACGTTT GGCCTGCCAC GGGTATCAAG
GAGCAGGCGC GCACCATCGA CAGCCACCTG TCACGGGTAC GCACCAAACT CGCGCTCTGG
CCGTTCAACG GCATCATGCT GCGTTCGGTC TATCGGCTCG GGAGCCGCCT GGACCCGATA
GAAACAGCCG TCGCGACACG CGGCCGGCCG TCATTGGCTG CCCTATGA
 
Protein sequence
MRIAALEDDP ARAIVLERAL HPGGHTLARF RSSQPMIEAM RREPFDLLLL DRDVAGTNAD 
DLLDWVRRTL GHGMPVMMLG QSDAEEVVVG CLAAGADAYV PQPARCDELR ARIEALTRRA
AVPGMTVATV PPGALGDTSD QLVCGVFRFA VAEHRVWVNS MTVALSPKEY ALALLLFRNL
GALVTRRAMI EHVWPATGIK EQARTIDSHL SRVRTKLALW PFNGIMLRSV YRLGSRLDPI
ETAVATRGRP SLAAL