Gene Rmet_6308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_6308 
Symbol 
ID4036746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007972 
Strand
Start bp163795 
End bp165036 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content62% 
IMG OID637975334 
Producthypothetical protein 
Protein accessionYP_582117 
Protein GI94152715 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.404497 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACGC ACACCCATTC CTCGATGCCG GCAGCAGCGC TTTTGTCAGC TCACGAGAGC 
CGGATCGCGT TGATTCGGCA GTATGCAAAC GAGGTGTCCG GCGACTTGTT CGCCGTAAAG
TGGCTGAGCA TTCTGACGCG GTGCGCGGAC TGGTTTTCCA GTATGCCCCT GCGCTTCGCT
GAACATGCGG AACCGGGCGG TGCATTCCGC GCTACGGTCG AAGCGGCGTA CTTTGCGATG
CGCCTGTCCG GCGCGCAGAA GTTCGGTGCA GACCAGCCGT CTGAGCGCCG GCGCATGCTC
GAGCCTCAGT ATCTCTACGC CCTTTTCCTT GCAGCGTGCT GCTCGCGGCT CGACGAGCCG
TGCCGTCACT TTCAGTTCTA TCGCGACAGC GATGGTGCAG AGTGGATCCC CGCTGCCCAC
GGCGCCTTCG GTCCCTGGGT CGGCACAAGC AATTACCGTG TCACGAGACG CGAGGCTATC
CAGCCCATTG AGCGTATGCG CACCGCACTT CTCGCGCGCG AGATTCTTGG TAGCGAACGA
TTAAGTGCCT TCGACAGCCA GGTGCTCACC GAGCTTTTCG GTGCGATCAA TCCGGATCCT
CGACCGACCG GACTCGAAAC GCTGCTGCAT AAGGTTGTAC GGCAATCCAT CGACACACTG
ACCCAGTTCG AGATCAAGGC CAGAAAAGCA GAATTCCCCC CGGACTCGAC GCCCGTTCCG
ACAGCCGAGA GGCTGGAGAA GGCTGTCAAT CCGTCCTTGG CTCAGGCTGA CGCACCGGTG
CCGGCGCCGC CGCCGGCCAC TTCCACGCAG CACGCCGACG GAAAGGGTAA CGTCTCGCCA
GCGGAATCCG CGGGCCTTGG TTCGCAGGCT CAGGTCGAAT CGCCGGATGC CACGGCCTCG
GATGCCTCGG CGGCGCGAAA TGTGGTTCAG CTCGACGGAG CGCGTTCGTT GCGCAAGGAG
TTATCCGCCG ACGATCCCTT CAAGGCTTTG GCCGGCAGCT CTAACTTGAT GCGGGAGTTC
TTCAAGGCGC TGGCCCAGGA CGTTGCCAGC GGCAAAGCCA AGGTCGCGCG GATCGACGGC
AAAGTCTCGA TTAGCAAGCG CTCGCTCGGC AACTTTGGCC TGGCGTCCGA CACCCTTGTC
GAGCATCTGC GAAAGGGCAA GCACCTATAC AAGGTCGATG GCCAGAATAT TCTGTTGGTC
GACGAAGTAG GACGTCTCAT CGCGCCGGAG ACTGCATCAT GA
 
Protein sequence
MSTHTHSSMP AAALLSAHES RIALIRQYAN EVSGDLFAVK WLSILTRCAD WFSSMPLRFA 
EHAEPGGAFR ATVEAAYFAM RLSGAQKFGA DQPSERRRML EPQYLYALFL AACCSRLDEP
CRHFQFYRDS DGAEWIPAAH GAFGPWVGTS NYRVTRREAI QPIERMRTAL LAREILGSER
LSAFDSQVLT ELFGAINPDP RPTGLETLLH KVVRQSIDTL TQFEIKARKA EFPPDSTPVP
TAERLEKAVN PSLAQADAPV PAPPPATSTQ HADGKGNVSP AESAGLGSQA QVESPDATAS
DASAARNVVQ LDGARSLRKE LSADDPFKAL AGSSNLMREF FKALAQDVAS GKAKVARIDG
KVSISKRSLG NFGLASDTLV EHLRKGKHLY KVDGQNILLV DEVGRLIAPE TAS