| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_6291 |
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| Symbol | |
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| ID | 4036729 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007972 |
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| Strand | - |
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| Start bp | 145725 |
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| End bp | 147542 |
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| Gene Length | 1818 bp |
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| Protein Length | 605 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637975317 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_582100 |
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| Protein GI | 94152698 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.563661 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGACTCT TTGAACGCTC CAAAAAGGGG CTGGTGCCCG AGGCCGCCGG CGGAATCATG
GTCATATCCG GCGCGGGTGC GGCTCGCGCG GGCACGGCGC AGGTCGCCGC GGCGCCCGTG
CACGCCGAAC CCTCCCTTTC ACTGCCCGAG ATGAGCGACG TCGGTTGTAC GGAGGTGCGA
ACGACCGATG ATCTGCCACC GTTCTCGCGG GTGCTGTACG ACGATCTCTC GTTGGCGCAA
TCACTGCGGC ACCAGATTTG CCCGGTGCTG ATCGAGGCGG CGGCCGATGG CCAGCGCGGC
AAGTTCGCGT TCATCCTGTT GGCCGATATG CGGTACTCGG ACTATACGGA CGAGATCCTG
CGTCAGGCGA AGTTGCGCTG GGACGCCGCC GACCCGCTGT TTTACACGGC CACTCCGCAG
GTCATGACTG CGCTGTCGCG CGGCGTCGAA GGCAGTACAC GTCAGGAAGG CATCCAGACC
ACGGGGCTGC GCAATGCGAG CGGCCTGTGG CAGACCTTCC TCGCTGCAGC GCAGTTCGCC
AAGCGCGAGC AGGCATCCGA CATCCACTTC GAGGTGAAGG ACAACAGCGA GCTGTCGCAG
ATCCGTTTCG CCATCGATGG CCATCTGGTT CTGCCGCCCG AGTTTCGCCT GCGCACGACC
GACCTGCTGG ACATGCTGTC TCACGTCTTC CAGAAAGGTA AGGGCGGCTC CCACGGGGTG
TTCAGCCGCG TGCAGCCGCA GCAGACGAGC ATCCGGACGG TGGTTGACGG CGTGCCGATG
GTGTTCCGGT GGGCCTCGAT GCAGAGCGCG GACGGTCACG TGACCGTCAT GCGTATGAAT
CCCGAGAACG CGACGACGAC TCAGGTCGAT TTTGTCAAAG ACTTGCACTT CTTCCAGCAG
CAGGCGGATG TCATCGACCG CTGCACGATG CAGATGGGCG GCGGGGTGGT GCTGGTCGGC
ACGGTGGGCT CCGGGAAGAC GACCACCGCG CACGCCGTCA TGCAGCGCCT GCCGTCCTGG
ATGAACAAGA TGTCGATCGA AGACCCGGTC GAATTGATGG CTCATGGCAC GCACCATTTC
TCGGTGGCAC GCCAACTGGA TGGCTCAAAC CGGGAAGAAG ATCCGTTCAT CGTTGCCAAG
CGTCAGCTCA AGCGGATGAA TCCCCATTTC GTGATGGTTG GCGAGGTGCG GGATTTTGAG
TCTGCAGGGC TGTTCCGCGA CGTTGCCGGC GCGGGCCTGC GTGCGATGAC CACGCTGCAC
GCGCCCTCGG CCACGGCGGC CACCGACCGC CTGGCTGACA GTGAACTGCA GATTCCGCGC
AGCGTGTTGG CCACTCCCGG CTTTGTGAAC CTCTACGTGT ACCAGGCGCT GCTCGCCAAG
ACGTGCGACT GCGGCCATCA CGGCGAGGAA GCCAAGAACA TTCTGGGTGC GGCGAAGCTC
CAGCAGATCG AGCGCCTGTT CCAGTTCGAC ATCGAGGGTA TCCGCGTACG GCGCGAAGCC
GGATGCGACA AATGCCGGCG AGCGAACCTG CCTGATCTGA ATGGCATTCG TGGCCGCGTC
ATGGCCGCCG AGATGTTCGA GCCGGACGAG CTGGACCTCA TGTACATCCG CGATGCGCGC
GCGATCGAAT TGCAGGCCCA TCAACGCGAA AAGCGCGTGA CCGGTTTCGA CGTACCGGAC
AGTACCGGCA AGTCGGTATT CGAAGTGGCC ATGTATCACG TGTTCGCCGG CACGGTGGAT
CCGCGCCAGG CCGAGCGGAT TCTGTCTCTG GATGCGTATG AAGCGAAGTT GAAGCGACTG
ACGGGAGCTC GACAATGA
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| Protein sequence | MRLFERSKKG LVPEAAGGIM VISGAGAARA GTAQVAAAPV HAEPSLSLPE MSDVGCTEVR
TTDDLPPFSR VLYDDLSLAQ SLRHQICPVL IEAAADGQRG KFAFILLADM RYSDYTDEIL
RQAKLRWDAA DPLFYTATPQ VMTALSRGVE GSTRQEGIQT TGLRNASGLW QTFLAAAQFA
KREQASDIHF EVKDNSELSQ IRFAIDGHLV LPPEFRLRTT DLLDMLSHVF QKGKGGSHGV
FSRVQPQQTS IRTVVDGVPM VFRWASMQSA DGHVTVMRMN PENATTTQVD FVKDLHFFQQ
QADVIDRCTM QMGGGVVLVG TVGSGKTTTA HAVMQRLPSW MNKMSIEDPV ELMAHGTHHF
SVARQLDGSN REEDPFIVAK RQLKRMNPHF VMVGEVRDFE SAGLFRDVAG AGLRAMTTLH
APSATAATDR LADSELQIPR SVLATPGFVN LYVYQALLAK TCDCGHHGEE AKNILGAAKL
QQIERLFQFD IEGIRVRREA GCDKCRRANL PDLNGIRGRV MAAEMFEPDE LDLMYIRDAR
AIELQAHQRE KRVTGFDVPD STGKSVFEVA MYHVFAGTVD PRQAERILSL DAYEAKLKRL
TGARQ
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