Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_6254 |
Symbol | |
ID | 4036692 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007972 |
Strand | + |
Start bp | 101586 |
End bp | 103436 |
Gene Length | 1851 bp |
Protein Length | 616 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637975280 |
Product | phage integrase |
Protein accession | YP_582063 |
Protein GI | 94152661 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGTGT CGGCGATCGC GACGGAGGAC GGTGGCCGTC ATGTGATCAG CCGCTATGGC GACTCCAAGT GGGATTTCTA CCCGTTCATT CCCCAACTCA ATCTAAAGGG CTCAAGCAAA CGCATCAATT GGGCAATACG TTTGAGCGAC GGATCGCTCC TCACGGATCC GCAACACGGA CAGCTTCTCG CCAGTAGCAA GGCGTATATC TGGTCGCTAT TCGCCGATCC GGTTGATGGC CGGAAGCGCC CTTCACTGCT CACGCTATGC GAAAAGACCG CTAGTCTCGT TCCGCTGCTA CGCTGGATGT TCGAGATGGG CCTGCGGCGC TTCGAGGACT TGTCGGGCCA CACTCTTCAA TATGTTCCGG CCGCGAGGCT CAATCTTAAT GGCTCAGCCG CCGTACCGCA TACAGTGGCA ACGAAGCTGT TTATTGTTGA AGACCTCTAT TTGCAGCGCG ACAAACTCGA CGACGCGCTT CGAAGTCACC CGTGGCCTCA TGAAAGCGCG ATGTCTCTGG CGGGCGAACG GCGGAGGCAC GCTCATCGCG TACCTAAGAC TGAGTTCATC CCCGATCAAA TAGCGCAGCG GATCACGGAT GCCGCACTCG ACTACGTCCG CGTGAAGGGC GACTCTATCT TGAAGGCCCG TGACGCCGTC GCCGAGGCCC GCCTACACAG CGTGGGCCGG TCTGGGGGAA CACTGACTCG TTATCTGGCA TCGGCCGCGA CCCAGAATGG ATTCGACGGA GTAAACCATG TAATCAGCGA GATGGGCATG CTGCGTACTG CGTGCTACGT CACTGTCGCC ATGTTCTCGG GGCTGCGGGA CTCTGAGATG ATGTCCCTGG AGGAAAACTG CCTTTCGTCG TCACGAAGCA AAGATGGGAG CATTGAAGTC CTCTGGCTGC ACGGAACGAT TTATAAAACC GGCCGCCGCG CAAAAAAGTG GATGGTCCCT GCCGTTGTCG GTGACGCTAT CAGCGTCTTG ACACGCCTTA CGGAGCCGTG GCGAATTGCA TTGGCTGGTG AGGAGCGCGC GCTCATGGGC CAACTGGACG CGTCGCTTGG CTCTGGGTCG AGCGTCAGAC GGCGCCTTGA CGAGGTTCGG GTCCAGAAAA AGAGCCTGTT TCTTGGCCGG CAACGGTCGG GGGGAATCGG CACTCTCTCC AGCCGCGCTA TCAACATGAA TCTGAAAGAG TTCTGCGAGG CCTGCAACAT TGTTGGTCTG GATGGGAATC CTTACCCCCT TACGACACAT CAATTCCGCC GCTCGTATGC GCGCTTCATC GCGAAGGCCG AACTGGGAGA TCTCCTGACA CTCCAACACC ACTTCGGCCA CTGGAGTCTG GACATGACTG CGCTCTACGC CGACGGAGCC CCGGATGAAT ACGAGACTGA CACGGAGCTG CTGGAGATGG TGACCGAGGA AAAGCGCATC CGGCAGACGG AGGTGATGAC GTCCTACCTT GACTCCGACG CTCCGCTCGC CAACGGCTCG CACTGGCTAG AGGATTGGCG CAGTACGGTT CGCACAGCCG CGAACAAAGA GGAGTTGATT GCCGAGTACG CCGGCACGAT CACCCTCAAT GGCACGGGCC ACTCGTGGTG CGTAGGTAAC GCCAAGGGCG TAGGTTGTGG CGGTCTATGC GTATTCGAGG CCCAAATGTG TGTTGATTGC AATCACGGGA TTATTGGTCA GGAGCACCGC TCCGTTTGGG AGGGCATTCG AGATCAGCAA ATCGAAGCCA TCGCCATTGG CGACCTTGGT GAAAGCGGGA AGGCTCGCGC CCAACAGATT CTGGTCAAGG CTGAGAAGGT TCTCCGTCGC CTCGATAAAG ACCCGGCATG A
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Protein sequence | MPVSAIATED GGRHVISRYG DSKWDFYPFI PQLNLKGSSK RINWAIRLSD GSLLTDPQHG QLLASSKAYI WSLFADPVDG RKRPSLLTLC EKTASLVPLL RWMFEMGLRR FEDLSGHTLQ YVPAARLNLN GSAAVPHTVA TKLFIVEDLY LQRDKLDDAL RSHPWPHESA MSLAGERRRH AHRVPKTEFI PDQIAQRITD AALDYVRVKG DSILKARDAV AEARLHSVGR SGGTLTRYLA SAATQNGFDG VNHVISEMGM LRTACYVTVA MFSGLRDSEM MSLEENCLSS SRSKDGSIEV LWLHGTIYKT GRRAKKWMVP AVVGDAISVL TRLTEPWRIA LAGEERALMG QLDASLGSGS SVRRRLDEVR VQKKSLFLGR QRSGGIGTLS SRAINMNLKE FCEACNIVGL DGNPYPLTTH QFRRSYARFI AKAELGDLLT LQHHFGHWSL DMTALYADGA PDEYETDTEL LEMVTEEKRI RQTEVMTSYL DSDAPLANGS HWLEDWRSTV RTAANKEELI AEYAGTITLN GTGHSWCVGN AKGVGCGGLC VFEAQMCVDC NHGIIGQEHR SVWEGIRDQQ IEAIAIGDLG ESGKARAQQI LVKAEKVLRR LDKDPA
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