Gene Rmet_6235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_6235 
Symbol 
ID4036673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007972 
Strand
Start bp84644 
End bp85447 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content62% 
IMG OID637975261 
ProductUBA/THIF-type NAD/FAD binding fold 
Protein accessionYP_582044 
Protein GI94152642 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0476] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value0.918479 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.783073 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTTCG TCCATCGCAT TCCAGAGGAC ATGCTGCTTC GGGCCTGGCG CGTATCCGTT 
GTGGGCGCCG GCGGTACCGG TAGCGCATTG CTGCCAAATC TTGCACGCCT GCATCATGCG
ATGCTCGAGC TGGGCCACCC CGGCGGCATC GACTGCACGG TCTACGATGA CGATACCGTC
AGCGAGACCA ACGTCGGCCG TCAGGGCTTC TATCCGGTGG ACGTGGGCCA GTACAAGGCG
ACGTTGATCG TGAACCGGCT CAACAACCTG ATGGGTACGC GCTGGGAAGC GCATACCCGG
CGCGTCGGGT CGGGAGATCG CTTCGTGTGC GACATGGTGA TCGGCTGCGT CGATAGCCGT
GCCGCGCGCA AGGCGATTGT CGGTGCCATG CAGCGCGGTG CCGGTGGTTA CTACCTCGAC
TGCGGCAACA ACGCGGATGA CGGTCAGGTA ATCCTCGGTC AAATCGGTGG TAAGGCAAAG
GAGCGCCTGC CGCACGTCGG TGATCTGTAT CCGCAGCTGC TGGATCCGAA AGGGGACAAG
GCTGATACCG CGCCTTCGTG CTCGATGGCT GAGGCACTGC AGAAGCAGTC CTTGGTGATC
AACATGGCGA TCGCAGTGCA GGCGTATAAC CTGCTCTGGA CGTTGTTCCG CACCGGCACG
CTGCAGAACT GCGGCGCGTT CGTGAACCTG TTGACGGGGA GAACGAGTCC GCTGCCCGTT
GATCCCGTCG TGTGGGAGCG CTTCGGCTAC AAGCTTGGCG CACGCAAAGC ACGAGCGAAG
CGCAAGCCTG CCCAGTCTGT TTAA
 
Protein sequence
MTFVHRIPED MLLRAWRVSV VGAGGTGSAL LPNLARLHHA MLELGHPGGI DCTVYDDDTV 
SETNVGRQGF YPVDVGQYKA TLIVNRLNNL MGTRWEAHTR RVGSGDRFVC DMVIGCVDSR
AARKAIVGAM QRGAGGYYLD CGNNADDGQV ILGQIGGKAK ERLPHVGDLY PQLLDPKGDK
ADTAPSCSMA EALQKQSLVI NMAIAVQAYN LLWTLFRTGT LQNCGAFVNL LTGRTSPLPV
DPVVWERFGY KLGARKARAK RKPAQSV