Gene Rmet_6225 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_6225 
Symbol 
ID4036663 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007972 
Strand
Start bp76455 
End bp76874 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content63% 
IMG OID637975251 
Producthypothetical protein 
Protein accessionYP_582034 
Protein GI94152632 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1664] Integral membrane protein CcmA involved in cell shape determination 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.0551295 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.629644 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATGC CAAGTACTCC AACTTTCAGC GTCCTGCGCG CCGGCATGAG CATTCACGGC 
GATCTCGTTT CGGAGGACGG CTTCACCTGC CTCGCCCTCG TTACCGGCAA CGTCAGGGCC
AGCCACGGCC TGTTGCATAT CGGTCGTGGC GGGGTCGTCC ATGGCGACGT GGAAGGCGAA
CACATCATCA TCGACGGCAC CGTAGAAGGT GACGTCAAGA GTCGGGTCTC CCTCAAGATC
AACGGCCGCG TGATCGGCCG CATCTTCTAC GCCGGGACCA TCCGGCTGGG CGAAAACGTG
ACGCTTGAAG GCAGCTCCAT CACTCGGGTG CCCGCTGTGG GCTACGTGGC GTCCCCCCAA
AAGGAGGATG CGCCCGCTAT CCACATCGAT GACCCGGAGG TCCCCGGTAC TGCGGCGTAA
 
Protein sequence
MTMPSTPTFS VLRAGMSIHG DLVSEDGFTC LALVTGNVRA SHGLLHIGRG GVVHGDVEGE 
HIIIDGTVEG DVKSRVSLKI NGRVIGRIFY AGTIRLGENV TLEGSSITRV PAVGYVASPQ
KEDAPAIHID DPEVPGTAA