| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_6218 |
|---|
| Symbol | |
|---|
| ID | 4036656 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007972 |
|---|
| Strand | - |
|---|
| Start bp | 68478 |
|---|
| End bp | 70751 |
|---|
| Gene Length | 2274 bp |
|---|
| Protein Length | 757 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637975244 |
|---|
| Product | putative DNA repair ATPase |
|---|
| Protein accession | YP_582027 |
|---|
| Protein GI | 94152625 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0419] ATPase involved in DNA repair |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.657002 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATCGGG ATAGCGTCAC GGTGGATCTG TCGACGCTGC CGGTCGGCCT GATTGCCCTT
GTCGGCCCCA ACGGGGCTGG GAAGACAACG ATCATGGACA ACCTGCATCC GTTTCCCGTC
ATGCCAAGCC ACGCCAGCAA GATGTCGGCC GACGCGTTCT CGTACTGGGA CCATCTCTGC
GCCCCGCGCG CGGAAAAGGA CCTCGAATGG GAGCACGGCG GCAAGACCTA CCGCTCCGCG
TTCGCGTTTC GCAATCCGGG CAAGAGCCGC AAGGCCGAGT ACTACCTGTT TGAGAAAGAC
GCCGCGGGTG AGTGGAAGCC TGTGCAGTTG GCAGACGGCA CGCTTTCGGA CGGCAAGGCG
GATACCTACA ACCGGTGTCT CGAAGCCGTC CTCGGGTCTC CAGAGGCGTT CTTCACGAGC
GTGTTTTCTG CCCAAAACAG GCGGCCCCTC GCGAGCTATC AGCCCGGCGA GATCAAGAAG
CTGCTCGCCG AGTTGCTGGG GATCGATCAC TTGCGTGACC TGTCTGCGAA GGCGGGCGAG
GTGGCCAAGC TGCTGACCCG CTCGCTCGAC ACCCTGCAGC GCGACGTGCT GACCCTAACG
GGCAAGCGTG ATCGTGCCGC GGTGGTGGCT CGGGAGATCT GGCAGATAGG CGAAAGCCTG
GATGCGGAGC GCAATGCTCG TGACGGTGAG AGTGCAAATG CAGCCAAGCT GCTGCAGGAG
CGCGCGACGC TGGCGGCGAA GCAAGCCGCC AATGCCGGTA CCGAAGCGCG GTTGCGGGAA
CTGAACCAGC GCAAGGGCGA ATTGGACCAG CGTGCGGCAT CGCTGGCCAG CGACGAGCAG
GCCGCTTCGG GACGTGTCCT GACACGCCGG AGCGATCTGG ATCGGCAGGT GGCAGGCCAT
CGCGCGGTAC TGGCGGAGGC CGCTGACATT GAGGCGGCGT CTGGCCAGCG TGACGTTCTG
CAGATGGCTA TTGGCCGAAG GCAGGAGGAA ATTGTCAGCC AGCGCGCTAT CGTGGAGAAG
CTCGATGCAG TCCAGGTCGA GCATGCAGCG CTCAGTACCG AGTTGAAGGG CCTGGAACAG
CAAGGCATTG CCGGCGCGAA GTTGGCCGAT TCCTTGAAAC TGCAAGCCGA GGTCATTGAA
ACGGTGCCAT GCCGTGAGGA TCCCATGCAC GCGAACTGTC CGTTGCTGGC ACAGGCTCGT
ACAGCAAAAG CGAGGCTTGG AGAGCAGGTG GTGTCGGTCA AAGCACTGCG TGAAAGCTAT
CGAAAGAAGC AGGAACAGGT GCAATCGATG CAAGGCCCGC TATCCGAGCG AGCCACGGCA
CGTGCTGCCT TGTCGGCATT GGAGGCCCAC CTGGTTCGCG ATCAGCAACT GCTGCAGCGA
CTCACAGCGA TGGCCGCCAA GAAGCCACTG CTGGATGCCG CGCGCGAAGG ACTGGCACAC
GCCGAACGGG ACCTGACAGC GCTGGCCGAG GAGGATGCTT CACGCGTAGC GCGCCAGAAG
CGCGATATCG CGGACGTGCA ATTCCAAGTC GCTGCGGTCT GTCGGGAACT GGCGACGCTG
GCCACGGAAG ACGTGACCGG CATGCTTGCC AAGATGGACC GCCAGATCGC AGCCAGCCGG
GAGGCTGTCG CTGCGATCGC CGGCCGGATC GAAGCATTGA TTCGGCAGGA GAGCATGTTG
GTGGCCGAGC GTGAGCGTCT TGAGGTCGAG CTTGCTGGTA TGCCGGCAAT CGAGGCCAAG
GTCCAGGCGC TGTCCGACCA GATTGCGCAA TGGAAGCTGC TCGCGAAAGG CCTTGGCAAC
GATGGTGTGA TCGCGTTGTC CATTGATGAC GCGGGACCCG CCATCACGCA GATCGTCAAT
GACTTGCTTT TGGCTTGCTA TGGACCGCGA TTCACCATCG CGATCCAGAC GCAGACAGCG
CTGGCCAGCG GTGAGCTGCG TGAGGGCTTT TCCCTCAACG TGATTGACGC TGACAACGAC
ACCACAAAGG AGTTTGGTGT GATGTCAGGG GGACAGAAAG TCTGGATCAA CGAGTGCCTG
ACGCGCGGAA TCGCCCTCTA TCGGGCGCAG GACGCGCAGC AGCCTTTCCA AACACTGTTC
ACTGACGAGG CGGATGGTCC GTTGGATCCG GAGCGTAAGC GCGCCTTCAT GAAGATGAAG
CGGGAGGTGC TGCGGATCGG TGGCTATCAG CGGGAGTTCT ATATTTCGCA GACTCCTGAC
CTGGTCGACG ACGCCGACGG CGTCATCGAT GTCGTTGCGC TGGCGCTCCA GTAG
|
|---|
| Protein sequence | MHRDSVTVDL STLPVGLIAL VGPNGAGKTT IMDNLHPFPV MPSHASKMSA DAFSYWDHLC
APRAEKDLEW EHGGKTYRSA FAFRNPGKSR KAEYYLFEKD AAGEWKPVQL ADGTLSDGKA
DTYNRCLEAV LGSPEAFFTS VFSAQNRRPL ASYQPGEIKK LLAELLGIDH LRDLSAKAGE
VAKLLTRSLD TLQRDVLTLT GKRDRAAVVA REIWQIGESL DAERNARDGE SANAAKLLQE
RATLAAKQAA NAGTEARLRE LNQRKGELDQ RAASLASDEQ AASGRVLTRR SDLDRQVAGH
RAVLAEAADI EAASGQRDVL QMAIGRRQEE IVSQRAIVEK LDAVQVEHAA LSTELKGLEQ
QGIAGAKLAD SLKLQAEVIE TVPCREDPMH ANCPLLAQAR TAKARLGEQV VSVKALRESY
RKKQEQVQSM QGPLSERATA RAALSALEAH LVRDQQLLQR LTAMAAKKPL LDAAREGLAH
AERDLTALAE EDASRVARQK RDIADVQFQV AAVCRELATL ATEDVTGMLA KMDRQIAASR
EAVAAIAGRI EALIRQESML VAERERLEVE LAGMPAIEAK VQALSDQIAQ WKLLAKGLGN
DGVIALSIDD AGPAITQIVN DLLLACYGPR FTIAIQTQTA LASGELREGF SLNVIDADND
TTKEFGVMSG GQKVWINECL TRGIALYRAQ DAQQPFQTLF TDEADGPLDP ERKRAFMKMK
REVLRIGGYQ REFYISQTPD LVDDADGVID VVALALQ
|
|---|
| |