| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_6210 |
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| Symbol | |
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| ID | 4036648 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007972 |
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| Strand | + |
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| Start bp | 57122 |
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| End bp | 60352 |
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| Gene Length | 3231 bp |
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| Protein Length | 1076 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637975236 |
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| Product | heavy metal efflux pump CzcA |
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| Protein accession | YP_582019 |
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| Protein GI | 94152617 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.339725 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.173806 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGAGA GCATTCTCAG CGGCTCAGTC CGCTATCGCT GGCTGGTCCT GTTTCTGACA
GCAGTTGTCG CCGTAATTGG GGCCTGGCAG CTCAACCTGC TCCCCATCGA CGTCACACCG
GACATTACCA ACAAGCAGGT CCAGATCAAC TCCGTGGTGC CAACGATGAG CCCCGTGGAG
GTAGAAAAGC GTGTCACGTA TCCAATCGAG ACGGCGATTG CTGGTCTGAA CGGGGTGGAA
AGCACGCGAT CGATGTCGCG CAACGGCTTC AGCCAGGTGA CGGTGATCTT CAAGGAGAGT
GCCAACCTGT ACTTCATGCG CCAGCAGGTG TCAGAACGAC TGGCACAGGC GCGGCCGAAT
CTGCCAGAAA ACGTCGAGCC ACAGATGGGG CCTGTTTCGA CGGGGCTGGG GGAAGTGTTC
CACTACAGCG TGGAATACCA GTATCCGGAC GGCACAGGGG CCTCCATCAA GGACGGCGAG
CCCGGATGGC AGAGCGACGG CAGCTTTCTC ACCGAGCGTG GCGAGAGGTT GGACGATCGT
GTGTCACGAC TGGCCTATTT GCGTACGGTG CAAGACTGGA TCATCCGCCC GCAATTGCGC
ACCACGCCTG GTGTCGCCGA TGTCGATTCC CTAGGGGGCT ATGTCAAGCA ATTTGTGGTG
GAGCCGGACA CGGGGAAGAT GGCAGCATAC GGAGTTTCCT ACGCGGACCT AGCCCGGGCG
CTCGAAGATA CCAACCTTTC TGTCGGCGCG AACTTTATTC GGCGCTCAGG CGAGTCGTAT
CTGGTCCGCG CCGACGCGCG TATCAAATCT GCGGACGAGA TATCCCGTGC CGTGATTGCG
CAGCGGCAAA ATGTCCCGAT CACAGTCGGG CAGGTAGCGC GCGTCAAGAT TGGTGGTGAA
TTGCGATCAG GCGCCGCCAG CCGGAATGGC AATGAAACGG TGGTGGGCAG TGCGCTGATG
CTGGTCGGTG CCAACAGCCG GACGGTGGCG CAAGCCGTGG GTGACAAGCT CGAACAGATC
TCGAAGACGC TGCCACCAGG CGTGGTGATT GTCCCGACGC TGAATCGTTC GCAACTGGTG
ATTGCAACCA TCGAAACGGT GGCAAAAAAC CTGATCGAAG GCGCGCTGCT CGTGGTGGCG
ATTCTGTTCG CGCTGCTGGG TAACTGGCGT GCCGCCACCA TTGCCGCGCT AGTCATTCCG
TTGTCCCTGC TGGTCAGCGC AATCGGCATG AATCAGTTCC ACATCTCGGG CAACCTGATG
AGCCTGGGTG CGCTCGACTT CGGCCTGATC ATTGACGGCG CGGTCATCAT CGTCGAGAAC
TCCCTCAGGC GGCTGGCCGA GCGCCAGCAC CGCGAAGGGC GCCTGCTGAC GCTCGATGAG
CGTTTGCAGG AAGTTGTCCA ATCGTCACGT GAAATGGTGC GTCCGACGGT CTACGGCCAG
CTTGTGATCT TCATGGTCTT CCTGCCATGT CTGACATTCC AGGGCGTGGA AGGCAAGATG
TTCTCCCCGA TGGTAATCAC GCTGATGCTG GCGCTTGCCT CTGCCTTCGT GCTGTCGCTC
ACCTTCGTGC CGGCCATGGT CGCCGTGATG CTCCGGAAAA AGGTTGCAGA GACAGAAGTG
CGCGTCATCG TGGCGACCAA AGAAAGTTAC CGGCCATGGC TGGAGCATGC CGTGGCACGC
CCAATGCCCT TCATCGGCGC AGGCATCGCG ACAGTCGCTG TGGCTACAGT GGCGTTCACA
TTTGTTGGTC GCGAGTTTAT GCCCACGCTG GATGAGTTGA ACCTGAACCT GTCGTCGGTT
CGGATTCCGT CTACGTCGAT TGACCAGTCG GTTGCCATAG ACCTGCCGCT CGAACGCGCC
GTCTTGTCGC TGCCGGAAGT GCAGACTGTG TATTCGAAGG CGGGTACGGC CAGCCTCGCC
GCCGACCCCA TGCCGCCCAA TGCATCGGAT AACTACATCA TTCTGAAACC GAAAAGCGAA
TGGCCGGAGG GCGTGACGAC CAAGGAACAG GTGATTGAGC GTATCCGCGA GAAGACAGCA
CCGATGGTCG GCAACAACTA CGACGTGACG CAACCGATCG AGATGCGCTT TAACGAGCTG
ATCGGTGGGG TCCGAAGCGA CGTGGCCGTA AAGGTGTACG GAGAGAATCT CGACGAGTTG
GCGGCCACAG CGCAACGCAT TGCCGCAGTC TTGAAGAAGA CGCCGGGAGC GACGGACGTC
CGTGTGCCTT TGACTAGCGG CTTTCCGACC TTTGACATCG TGTTCGACCG CGCCGCAATC
GCCCGATATG GACTCACGGT CAAGGAAGTC GCCGATACTA TTTCCACCGC CATGGCGGGC
CGACCTGCCG GGCAGATTTT CGATGGTGAC CGCCGCTTCG ATATTGTGAT CCGCTTGCCC
GGTGAGCAGC GGGAAAACCT CGACGTCCTC GGCGCGCTTC CCGTCATGTT GCCGCTATCG
GAAGGCCAGG CCCGCGCCTC GGTGCCTTTG CGCCAACTGG TACAGTTCCG GTTCACGCAG
GGGCTCAACG AAGTAAGCCG CGACAACGGA AAGCGGCGCG TCTACGTGGA GGCCAATGTC
GGCGGCCGTG ACCTGGGCAG TTTTGTGGAC GATGCCGCGG CGCGGATCGC CAAGGAAGTG
AAGTTGCCGC CGGGTATGTA CATCGAATGG GGTGGCCAAT TTCAGAATCT TCAGGCGGCT
ACGAAGCGCC TGGCCATCAT TGTCCCGCTG TGCTTTATTT TGATTGCGGC GACGCTGTAC
ATGGCGATCG GCAGCGCGGC GCTGACGGCG ACCGTGCTGA CCGCCGTGCC GCTGGCACTT
GCGGGGGGCG TGTTTGCGCT GCTACTGCGC GGGATTCCGT TCTCTATTTC GGCGGCAGTT
GGCTTCATTG CGGTATCCGG TGTGGCGGTG CTGAACGGAC TGGTGCTGAT TTCCGCTATC
CGAAAACGCC TGGACGATGG GATGGCGCCT GACGCTGCGG TGATTGAAGG TGCGATGGAA
CGCGTGCGCC CGGTACTGAT GACGGCTCTG GTGGCCTCTC TGGGCTTCGT GCCGATGGCG
ATTGCTACAG GTACAGGTGC CGAAGTCCAG AAACCACTAG CTACGGTCGT CATCGGTGGA
CTCGTCACCG CAACTGTGCT GACACTGTTT GTACTGCCGG CCCTTTGCGG CATAGTACTG
AAGCGCCGGA CCGCTGGCCG ACCGGAAGCG CAAGCAGCGC TGGAAGCATG A
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| Protein sequence | MIESILSGSV RYRWLVLFLT AVVAVIGAWQ LNLLPIDVTP DITNKQVQIN SVVPTMSPVE
VEKRVTYPIE TAIAGLNGVE STRSMSRNGF SQVTVIFKES ANLYFMRQQV SERLAQARPN
LPENVEPQMG PVSTGLGEVF HYSVEYQYPD GTGASIKDGE PGWQSDGSFL TERGERLDDR
VSRLAYLRTV QDWIIRPQLR TTPGVADVDS LGGYVKQFVV EPDTGKMAAY GVSYADLARA
LEDTNLSVGA NFIRRSGESY LVRADARIKS ADEISRAVIA QRQNVPITVG QVARVKIGGE
LRSGAASRNG NETVVGSALM LVGANSRTVA QAVGDKLEQI SKTLPPGVVI VPTLNRSQLV
IATIETVAKN LIEGALLVVA ILFALLGNWR AATIAALVIP LSLLVSAIGM NQFHISGNLM
SLGALDFGLI IDGAVIIVEN SLRRLAERQH REGRLLTLDE RLQEVVQSSR EMVRPTVYGQ
LVIFMVFLPC LTFQGVEGKM FSPMVITLML ALASAFVLSL TFVPAMVAVM LRKKVAETEV
RVIVATKESY RPWLEHAVAR PMPFIGAGIA TVAVATVAFT FVGREFMPTL DELNLNLSSV
RIPSTSIDQS VAIDLPLERA VLSLPEVQTV YSKAGTASLA ADPMPPNASD NYIILKPKSE
WPEGVTTKEQ VIERIREKTA PMVGNNYDVT QPIEMRFNEL IGGVRSDVAV KVYGENLDEL
AATAQRIAAV LKKTPGATDV RVPLTSGFPT FDIVFDRAAI ARYGLTVKEV ADTISTAMAG
RPAGQIFDGD RRFDIVIRLP GEQRENLDVL GALPVMLPLS EGQARASVPL RQLVQFRFTQ
GLNEVSRDNG KRRVYVEANV GGRDLGSFVD DAAARIAKEV KLPPGMYIEW GGQFQNLQAA
TKRLAIIVPL CFILIAATLY MAIGSAALTA TVLTAVPLAL AGGVFALLLR GIPFSISAAV
GFIAVSGVAV LNGLVLISAI RKRLDDGMAP DAAVIEGAME RVRPVLMTAL VASLGFVPMA
IATGTGAEVQ KPLATVVIGG LVTATVLTLF VLPALCGIVL KRRTAGRPEA QAALEA
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