| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_6208 |
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| Symbol | |
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| ID | 4036646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007972 |
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| Strand | + |
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| Start bp | 54685 |
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| End bp | 55941 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637975234 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_582017 |
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| Protein GI | 94152615 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0682247 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACAGG TGATCTCCTC GTTCCTTTGT CGACCTCGCT TCGTCGGCTC CGCAATATGG
CTGCTGCCCG TTGCGTTGAG CCACGCTGCC GAGGCGCCTC CTTTTCCGAA CCTGTTGCAG
CAATCGCTTG CACTCGCTCC GGCGATGGTC GCGCAGGCCG CCAATGTTCG TGCGGCTGGC
GCCGATGCTG CTCAGGCCCA AGCCTGGCTG AATCCGCGAA TCGATACGGT GCTTGAAAAC
CTTGGCGCTC CCAGTAGTGA TGGGCTGAGT CAGCGCCAGA ATACCTATTC GATCACGCAG
CCTTTCGAGC TAGGAGGTAA GCGCGGCGCA CGGATCGAAG TTGGCGAACG CAACTTCGCT
GCGGCGCAAG CACGGGAGCG TCAGGCACAG GTAGCCTACG CCGCCGAACT TGCAGTAGCC
TATGCAACGG CTGAAGCGGC GCTCGGACGC AAGATACTGG CCACGGAAAA CCTGGCGCGT
GCCAATGAAG AGTTGGCGGC CGCGCGTGCG TTGGTCGATT CCGGGAAAGA AGCCAGCTTG
CGCAGCGCGC AGGCCAAGGC CAGTGTGGCG GCGGCGCAGG CCGCGGAGGC GGCAGCCACC
AACGATGCCA CCCAGGCTCT GGCGAGATTG TCCGCGATGT CCGGCGCCTC CGAACCCTAT
ACGGCCGTCA CGAGTTCCTT GCTGACGACC CAGGCCGTCG TCCCGAATGC CCCGGCAGCA
CTCGCCGAGT CTCCGTCAGT GCGGGCCGCC GAAGCGGAAC GCAATGCGCT GGATGCTCAA
GTTGACGTCG AGAGGAAGCG CTGGATTCCT GATGTTGGCG TCAGTGCGGG CGTCCGCCGC
TATGGCTGGA CCAATTCCAG TGGCTATGTG GTTGGGGTCA CGGCCTCCAT TCCATTGTTC
GATCAGAACC GGAACGGCAT CAATGCCGCG GTTGAGCGGG TTGCAGCCGC CCAAGCGCGG
CTTGACAGCG TCCGGCTCGA GGCCAACGTG GCGCGCCAAT CGGCCATATC CCAGGTAGCG
ACCGCCGACA AGCAGCTCGC TGCTGCCAGC GAAGGAGAGC AGGCGGCGGC AGAAGCCTAT
CGCATGGGGC GCATTGGCTA TGAATCCGGC AAGACGCCAC TGATGGAATT GCTAGCGGTG
CGGCGAGCGC TCGTCGACGC CCGGCAACTG ACGATCGATG CGCGCCTGGC GCGCGTGCGC
GCCCTGGCGG CGCTGGCACA GGCGGACGGC CGCCTAGCCT TTGAGGAATC ACGATGA
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| Protein sequence | MKQVISSFLC RPRFVGSAIW LLPVALSHAA EAPPFPNLLQ QSLALAPAMV AQAANVRAAG
ADAAQAQAWL NPRIDTVLEN LGAPSSDGLS QRQNTYSITQ PFELGGKRGA RIEVGERNFA
AAQARERQAQ VAYAAELAVA YATAEAALGR KILATENLAR ANEELAAARA LVDSGKEASL
RSAQAKASVA AAQAAEAAAT NDATQALARL SAMSGASEPY TAVTSSLLTT QAVVPNAPAA
LAESPSVRAA EAERNALDAQ VDVERKRWIP DVGVSAGVRR YGWTNSSGYV VGVTASIPLF
DQNRNGINAA VERVAAAQAR LDSVRLEANV ARQSAISQVA TADKQLAAAS EGEQAAAEAY
RMGRIGYESG KTPLMELLAV RRALVDARQL TIDARLARVR ALAALAQADG RLAFEESR
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