| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_2400 |
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| Symbol | |
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| ID | 4035009 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter cryohalolentis K5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007969 |
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| Strand | - |
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| Start bp | 2952710 |
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| End bp | 2954032 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637974882 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_581661 |
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| Protein GI | 93007224 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.705753 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGATG TTGAAGACAA CAAGCTGCCA GTTGAATCTG AGCTACCCCC ATACCGCCAA
TCTGATGCGC GAACGTCTAA GCCTTTATCA GATAAGCCAT TATCAAAATT TCCTTTATGG
TTATTACCAG TATTGGCTAT TGTGCTCGTT ATTGGGGTAT TGGTTGGTAA GTACTGGGGC
AATGATGAGG AAGCGAGCAA TGAGTCGCCC GTTGCTAACA ATGTGCAAAA CGATAGCGCT
AACCTAAAAG ATGCTAGCAT TGAGCAAGCT GTATTATCGG TCGAAACAGT GCTACCAAGC
CAAGATAATA TTGGTAATAC GCTCAGTGCT GACGGAACCA TCAATGCTAA GGATGTCGCT
AATGTCAGTG CCAAAGTAAA CGGCGTAGCG ATTGAACGGA TATTGGTCGA AGAAGGTCAG
CGTGTTAAAG CTGGTCAAAT ACTGGCTGTA TTTGATACCG ACGCGATGGA GCAGCAAGTC
TTGCAAGCAG AAGCTGATGT TGCCGAAGCA AAAGCGACGC TTGCCAATGC CACTGCCGAT
GCCGCCCGCG TCCTGCCACT TATTGATATT GATGCCATTA GCAAGCAAGA AGCGGATCGC
TATCGTACGG CTAAACTACA AGCGCAGGCG TCACTGCAAG CCTCTAAAGC TCGACTGAGT
ACGCAGCGCT TGAGTGTCAA TAATGCCAAT GTGGTTGCAC CGGTTAGCGG TATTATTAGT
GAAAAAATGG CTGAAGTTGG TATGATTGCT GGTGGAGACC CACTATTTAC TATTATCAAA
GGTGGTATTT TGGAATGGCG TGCGGATATC GATCCTAAGC TGATTGGTGA GGTTAATGTT
GGCACACCAG TCCAAGTTAG CCTACCGGGC GGCGATTCTG TCATGGGGGA GGTCAGTCGC
ATTGCACCAA CTGCTGATAA TAATAGGCAA ATTACCATTT ATGCTAGCCT TGCTGCTAAC
GCGAAAGTAA GAGCAGGCAT GTATCAAACG GGCGAGTTTT TATTGGGTAG TAGCAGCGCT
CAAACGGTTC CTAATAGCGC CATTGTCAGC AATGACGGCT ATGACTATGT GATGCTAGTG
ACCAATATCA GTACTAAAGA CGGTAAAAAC GGTCACAACA TTGGCCGTAT CAAACAACAA
CGTGTGACCC TTGGTGAGCG CTTTGGCGAT AGTATTATGC TCACAGAGCC ACTCCCTGCA
GAGAGCCGAC TTGTAAAGCA AGGGGGAAGC TTTTTAAATA ATGGTGACTT GGTACGTGTC
GTTGATGGTC TGAGTCAAAC TGGTAAGCAG GCTACTAGCA CAGACACGCA GGCGCGCTCA
TGA
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| Protein sequence | MSDVEDNKLP VESELPPYRQ SDARTSKPLS DKPLSKFPLW LLPVLAIVLV IGVLVGKYWG
NDEEASNESP VANNVQNDSA NLKDASIEQA VLSVETVLPS QDNIGNTLSA DGTINAKDVA
NVSAKVNGVA IERILVEEGQ RVKAGQILAV FDTDAMEQQV LQAEADVAEA KATLANATAD
AARVLPLIDI DAISKQEADR YRTAKLQAQA SLQASKARLS TQRLSVNNAN VVAPVSGIIS
EKMAEVGMIA GGDPLFTIIK GGILEWRADI DPKLIGEVNV GTPVQVSLPG GDSVMGEVSR
IAPTADNNRQ ITIYASLAAN AKVRAGMYQT GEFLLGSSSA QTVPNSAIVS NDGYDYVMLV
TNISTKDGKN GHNIGRIKQQ RVTLGERFGD SIMLTEPLPA ESRLVKQGGS FLNNGDLVRV
VDGLSQTGKQ ATSTDTQARS
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