Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcryo_2282 |
Symbol | |
ID | 4035357 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter cryohalolentis K5 |
Kingdom | Bacteria |
Replicon accession | NC_007969 |
Strand | + |
Start bp | 2801787 |
End bp | 2804924 |
Gene Length | 3138 bp |
Protein Length | 1045 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637974761 |
Product | membrane protein-like |
Protein accession | YP_581543 |
Protein GI | 93007106 |
COG category | [S] Function unknown |
COG ID | [COG5373] Predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.650605 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0137094 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATGCTAT ATTTTTTGAT GGGTTCTTTA GGTTGGCTGG TTGTAATTAC TTTAATAGTA ATTATGATTG CCCTTTATAT TAGGCTGCAT CAGCAATTGG CACAACTGCG TCAAGACATG GCGCAGCTAA AGAGCGAGCT TGAGCAGCAA AAGAATAGTA CCACTACTAT AGAAGATACT GCTGTAAAAA GTATCTTTGA CATCGAATTA TCTGGGGATG ATGCATTGTC ATCAACAGAA AAATCAATGC CGCCCCCATT ACCACTTAGT GCTTTATCCT CTAATCCTCT ATCAAATAAC TTTGTATCAA CATCTGCAAA ACAATCATCA GTTTCCAATA GCCAGCTTTT GATCGATAAA GCCGCTAATG CGCCGATAGA ACCTGACGAG CGCTCATTTC CTATTGTTAC CTCACTTCTT CATTCGATTC AAAACTGGTT TTTGGGTGGC AACCTAGTAG TGCGTGTTGG AGTATTGGTT TTACTGATCG GCGTGGTTCT ACTGCTGCGC TTACTAAGTG ACTTAATCCA AGTGCCTATT AGCGTCAAGC TAACAGTCAT TATTATCCTA GGATTAGGGC TGGCAGGATT AGGCTTAAAG CTAGCGGCAA AACGCTTTGC GTATGGTATT AGCTTGCAAG GTACTGGCTT AGCCATTGCT TATTTGACCA CATTTTTTGC CTATAGGGTC TATCAGGTGA TTGGTAGTCT GCCAAGCTTT ATAGCGCTTG GCATATTATC AGCAGTCACG GTCGCTTTAG CGGTACGCCA AAACGCTTTT CCTTTGGCAT TATTAGCATT ATCCGGTGGA TTTTTTGCAC CGATTTTGAC CAGTCAAGAT ACTGGCAGCT TAACGATACT CTTTAGCTAT TACTTGTTAT TAAATATTAC CATTGCCATT ATTGCCCATT ATCGCCCATG GAAGGTGCTC AATTTATTTG GCGCGAGCGT CACATTTGGT TTGGCATACT ACTGGGGATT GACTGAAAAT TTAGCGGTAA TTATTGATAA TCAGCGTTGG ACGTTGGTAT TACTCGTCGC GCTACATGTA CTGCTGTATC TATTCGTCGT CATTCGCTAT GCACAGCAAA TCATTGCTTA CAATGATACT ATTTCTTATG ACAATAGTGA CGCCACTACC GTTATGGCTA CTGATACCGA CCAGACTGCT GATATTAAGA GTCAGCATGC CAGCTATGTG TTTCCTATTG ATATTGGGCT ACTGTTCTCT GTACCGCTAA TGGCATTTGG TTTATTTTCA GCGTTACTGT ACGATATCAA TCACGCTTTA ACCCTCACTA GCGCAGTTTT AGCCGTAATT TATTTGGGGC TTGGTTGGAC GTTTATTCAG CGCAGTCAGC GTTATGCATT GATTATGGAA GGGATGCTGG CATTAGGCTT TGGCTTTTTA GCATTAGTGA TTCCGCTGGC ATTAAATGCA GAATGGATTG CCTTCGGCTG GTCGGTTCAA GGATTAGCAT TGGTATGGTT TGGCAGGCGT TCTCTTCGTG CATGGTCAGT ATTATTGGGT TTAGTATTGC AGCTAATTAG CATTGGTATG TTATCAAATA CCTTTGTCAT TACCCTTGAT TACTATCCAA CGCTCGCATT AACCATTTCT GCCATCAGTG CAATTGCCAG CGTCTTTATC TTACGTGCCA GCAATTCGCC TATTTCATTA CCTATTTCAT TACCTATTTC ATTACCTATT TCATCGCCTA TGACAGCGAC GCAAGGCTCA ATGCCATCTG TCCACGATTA TGAAAATCAG CTTAACGCCA ATAATACGCT GTCCGAATAC GGCAAAGCGT TAGGCATTAG CGAGACAGCA ACTCAGCAAT GGTTTGAAAG TATCAACAAC CAAAGTATCG CGTTTAAAAT CATTTGGCAA CGTCCTTCTT TGATACGGCT GTTAACGCTC ACTGCGGTGG GTTGGCTGCT GTATGTGTTA GTCCTCGATT TTGACCAATG GCTTGCCAAC TGGCAATTGG CAACATCGAC GCTTATTGCC TTAGCAAGTG TCGTTAGCAT GATTATTTAT CATTTTATCA ATCAATATCG TTCATGGCGA GAAATCAGAC AATTTAGCCA TAGTATGCTG CTGTTATTTT ATGCGATGCT GATCTTACAA CTGCCACAAC AATATGAATT TGACTATCAA TGGACAGCCT TTTATTGGCC GATATTTACA ACGTTGTTCA TTGGCTGGCT GATTCTTGGT CAATTATGGC TAAAGACGTG GCATAACAAT GCTAATAACG ACAACAATAA CGGTGCAAAA TTAAAAGGTC ACGATAGTGC AAGCTGGCTT GGTACTGGCA TTATAATTTT GGCTGAGGCT GTACATTATG AATTGCCCGA TTCAAAAGGC GTGATGACCA TCCTTGTGCC GGTTGCGCTT ATGCTAGCTG GGCTCTGGTT GACGTACCGT CAGCAAAATA ATAATCTGAC GAAAAATTCA TCTTCACCGC CCCCTATGTA TTGGTTTGAC CGGCAACGTG CACTATTAGG TTGCGCCAAA ATATTTGTGC CATTAACATT GTGCTGGGTC ATTTTTACCA ATTTCACCTA TGATGGCGTG ATCTGGGGAC TGCCCTATTT GCCCCTGCTT AACTTGTATG ATGTAACGTT GTGGCTGGTG TTGTTTTACG GATTGGGCGT TTATTTATTG CGTCAACGTG GCGCGCACTC GCAAAATCTA TTTAGCGCCA TTCGTAAGAG TGACACGTTG TTGATCGTAC TAGCGCTGAT TAGCTTTTGG ATACTCTCTA GTATGCTGGT CAGAACGCTG CACGCTTTTA TTAATACACC GCTGTGGATA GCGGAATTAT ATGATTACCA TACTGGCGGC GCATGGGATA GTGAGCAAGT GCAAACGGGT CTGACGATTT TATGGACGCT ACTGGCATTG GTCGCCACCA TTATCGCCAG TCGTTACCTC CAGCGCGCGC TTTGGTTTAT GGGCATTGGT TTATTGGGTA TTGTGGTCTT AAAATTGGTC TTAGTTGATT TGTCACAGAC CGAAGCGATT TGGCGAGTGA TTTCTTTCCT TGGTGCGGGT AGCTTGATTT TATTGATTGG TTATTTGGCA CCGTTGCCAC CAGCGCGTGA TGGAACAGCA GAACAGGTCG AATCATAG
|
Protein sequence | MMLYFLMGSL GWLVVITLIV IMIALYIRLH QQLAQLRQDM AQLKSELEQQ KNSTTTIEDT AVKSIFDIEL SGDDALSSTE KSMPPPLPLS ALSSNPLSNN FVSTSAKQSS VSNSQLLIDK AANAPIEPDE RSFPIVTSLL HSIQNWFLGG NLVVRVGVLV LLIGVVLLLR LLSDLIQVPI SVKLTVIIIL GLGLAGLGLK LAAKRFAYGI SLQGTGLAIA YLTTFFAYRV YQVIGSLPSF IALGILSAVT VALAVRQNAF PLALLALSGG FFAPILTSQD TGSLTILFSY YLLLNITIAI IAHYRPWKVL NLFGASVTFG LAYYWGLTEN LAVIIDNQRW TLVLLVALHV LLYLFVVIRY AQQIIAYNDT ISYDNSDATT VMATDTDQTA DIKSQHASYV FPIDIGLLFS VPLMAFGLFS ALLYDINHAL TLTSAVLAVI YLGLGWTFIQ RSQRYALIME GMLALGFGFL ALVIPLALNA EWIAFGWSVQ GLALVWFGRR SLRAWSVLLG LVLQLISIGM LSNTFVITLD YYPTLALTIS AISAIASVFI LRASNSPISL PISLPISLPI SSPMTATQGS MPSVHDYENQ LNANNTLSEY GKALGISETA TQQWFESINN QSIAFKIIWQ RPSLIRLLTL TAVGWLLYVL VLDFDQWLAN WQLATSTLIA LASVVSMIIY HFINQYRSWR EIRQFSHSML LLFYAMLILQ LPQQYEFDYQ WTAFYWPIFT TLFIGWLILG QLWLKTWHNN ANNDNNNGAK LKGHDSASWL GTGIIILAEA VHYELPDSKG VMTILVPVAL MLAGLWLTYR QQNNNLTKNS SSPPPMYWFD RQRALLGCAK IFVPLTLCWV IFTNFTYDGV IWGLPYLPLL NLYDVTLWLV LFYGLGVYLL RQRGAHSQNL FSAIRKSDTL LIVLALISFW ILSSMLVRTL HAFINTPLWI AELYDYHTGG AWDSEQVQTG LTILWTLLAL VATIIASRYL QRALWFMGIG LLGIVVLKLV LVDLSQTEAI WRVISFLGAG SLILLIGYLA PLPPARDGTA EQVES
|
| |