Gene Pcryo_1813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_1813 
Symbol 
ID4034815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp2237876 
End bp2239561 
Gene Length1686 bp 
Protein Length561 aa 
Translation table11 
GC content46% 
IMG OID637974282 
ProductBCCT transporter 
Protein accessionYP_581074 
Protein GI93006637 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1292] Choline-glycine betaine transporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.566263 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGATT TAAAAGGATT TAACAGTAAG CAACATGAGC AAGGACGCTC TCATAAAACC 
GATAAGATAG CGGATAATTT AATGCATGTA GAGACTCCAT CAGATACTTT AGGGCTAAAA
AACCCAGCAT TTTGGTACAG TGGCGGCTTT ATCATTGCCT TTGTTCTTAT GGCCATCTTT
GCCGAAGAGC GTTTGGGAAA GCTCATCAAT ACCGGATTTT CTTGGTCGGC AACGGTCTTT
GGTCCTTTTT GGCAAATTTT ATTGTTAGCG ACCTTTGTGA TTGCACTAGC AGTCGGCGCA
GGTCGTACAG GACGCGTCAT TTTAGGTAAT CTAGCGAAGC CTGAGATGGA CGGTTTTAAA
TGGATGGCGA TTTTATTCTG TACGCTGCTC GCTGGCGGCG GCGTCTTTTG GGCAGCCGCT
GAACCTATCG CTCATTTCGT TAGCGCACCG CCACTGTATG GCGAATCTGC TGATATCCAA
CAACGCGCTT TCAATGCGCT ATCTCAGTCC TTTATGCATT GGGGATTTCT AGCTTGGTCA
ATTGTCGGTA GCTTGACGGC TATTGTGGTG ATGCATCTAC ATTATGATAA AGGCTTGCCG
CTGAAACCGC GTACGCTTTT ATACCCTATG TTTGGTGAGC GCGTGCTTAC AGGTCATACG
GGTGCAATTA TCGACGCTTG CTGTATTGTC GCGGTTGCTG CCGGTACGAT CGGTCCTATT
GGATTTTTGG GATTACAAAC CAGCTATGCG TTGAATACGC TGTTTGGTAT TCCTGATACC
TTTACTACCC AACTTATCAT TATCATCTTT GCTATTGCAC TTTATACGCT CTCAGCCATT
AGTGGTCTTG CTCGAGGTAT GCAGCTGCTC AGTCGCTTTA ATGTCATATT GGCCTTTGGT
CTGATGGTCT TTATTTTGAT GTTTGGTCCT ACCAAATTTA TTGTTAATGG GTATATTCAA
GGTGTTGGCA CCATGGTGCA AAACTTTATC CCGATGGCAA CCTATCGCGG TGATGAAGCT
TGGCTTGGTG GTTGGACGGT TTTCTTTTGG GGCTGGTTTT TGGGTTATGG CCCGATGATG
GCAATATTTA TCGCTCGTAT CTCACGCGGT CGCACGATTC GTGAATTGAT TACGACCGTG
TGCATTTTGG CGCCATTGGT TACCTGCTTT TGGTTCACGG TCATCGGCGG TTCGGGTCTT
GCGTTTGAGA TTGCCAATCC TGGTAGTGTG AGTACAGCAT TTGAAGGCTT TAATCTTCCT
GGAGCACTGC TTGCCATCAC TCAGCAGCTG CCATTTCCTT TGATTACTTC CTTATTGTTT
ATCATTCTAA CCATGGTTTT CATTGTTACT ACTGGTGATT CGATGACCTA TACCATCAGT
GTCGTGATCA GTGGTGAGAG AGAGCCAAAT GCTATCATTC GCACCTTTTG GGGCGTGATG
ATGGGGGTGA CGGCGATTGT TCTTATCTCG CTTGGTGCAG GCGGCGTGAC AGCGTTGCAA
TCCTTTATTG TCATTACGGC GGTGCCTGTC TCCTTTGTTT TGCTGCCATC ATTATGGAAT
GGACCAAAAA TTGCGCAGCA GATGGCAAGG GATCAAGATC TTTATCGCCC TAATAGCGTG
GAAACTGCTC ATCAACTCAT CGAAGAGCAG CTTGTCGAAA AAAGTATTGG TAAAGAAGTT
GATTAG
 
Protein sequence
MADLKGFNSK QHEQGRSHKT DKIADNLMHV ETPSDTLGLK NPAFWYSGGF IIAFVLMAIF 
AEERLGKLIN TGFSWSATVF GPFWQILLLA TFVIALAVGA GRTGRVILGN LAKPEMDGFK
WMAILFCTLL AGGGVFWAAA EPIAHFVSAP PLYGESADIQ QRAFNALSQS FMHWGFLAWS
IVGSLTAIVV MHLHYDKGLP LKPRTLLYPM FGERVLTGHT GAIIDACCIV AVAAGTIGPI
GFLGLQTSYA LNTLFGIPDT FTTQLIIIIF AIALYTLSAI SGLARGMQLL SRFNVILAFG
LMVFILMFGP TKFIVNGYIQ GVGTMVQNFI PMATYRGDEA WLGGWTVFFW GWFLGYGPMM
AIFIARISRG RTIRELITTV CILAPLVTCF WFTVIGGSGL AFEIANPGSV STAFEGFNLP
GALLAITQQL PFPLITSLLF IILTMVFIVT TGDSMTYTIS VVISGEREPN AIIRTFWGVM
MGVTAIVLIS LGAGGVTALQ SFIVITAVPV SFVLLPSLWN GPKIAQQMAR DQDLYRPNSV
ETAHQLIEEQ LVEKSIGKEV D