Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcryo_1813 |
Symbol | |
ID | 4034815 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter cryohalolentis K5 |
Kingdom | Bacteria |
Replicon accession | NC_007969 |
Strand | - |
Start bp | 2237876 |
End bp | 2239561 |
Gene Length | 1686 bp |
Protein Length | 561 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637974282 |
Product | BCCT transporter |
Protein accession | YP_581074 |
Protein GI | 93006637 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1292] Choline-glycine betaine transporter |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.566263 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGATT TAAAAGGATT TAACAGTAAG CAACATGAGC AAGGACGCTC TCATAAAACC GATAAGATAG CGGATAATTT AATGCATGTA GAGACTCCAT CAGATACTTT AGGGCTAAAA AACCCAGCAT TTTGGTACAG TGGCGGCTTT ATCATTGCCT TTGTTCTTAT GGCCATCTTT GCCGAAGAGC GTTTGGGAAA GCTCATCAAT ACCGGATTTT CTTGGTCGGC AACGGTCTTT GGTCCTTTTT GGCAAATTTT ATTGTTAGCG ACCTTTGTGA TTGCACTAGC AGTCGGCGCA GGTCGTACAG GACGCGTCAT TTTAGGTAAT CTAGCGAAGC CTGAGATGGA CGGTTTTAAA TGGATGGCGA TTTTATTCTG TACGCTGCTC GCTGGCGGCG GCGTCTTTTG GGCAGCCGCT GAACCTATCG CTCATTTCGT TAGCGCACCG CCACTGTATG GCGAATCTGC TGATATCCAA CAACGCGCTT TCAATGCGCT ATCTCAGTCC TTTATGCATT GGGGATTTCT AGCTTGGTCA ATTGTCGGTA GCTTGACGGC TATTGTGGTG ATGCATCTAC ATTATGATAA AGGCTTGCCG CTGAAACCGC GTACGCTTTT ATACCCTATG TTTGGTGAGC GCGTGCTTAC AGGTCATACG GGTGCAATTA TCGACGCTTG CTGTATTGTC GCGGTTGCTG CCGGTACGAT CGGTCCTATT GGATTTTTGG GATTACAAAC CAGCTATGCG TTGAATACGC TGTTTGGTAT TCCTGATACC TTTACTACCC AACTTATCAT TATCATCTTT GCTATTGCAC TTTATACGCT CTCAGCCATT AGTGGTCTTG CTCGAGGTAT GCAGCTGCTC AGTCGCTTTA ATGTCATATT GGCCTTTGGT CTGATGGTCT TTATTTTGAT GTTTGGTCCT ACCAAATTTA TTGTTAATGG GTATATTCAA GGTGTTGGCA CCATGGTGCA AAACTTTATC CCGATGGCAA CCTATCGCGG TGATGAAGCT TGGCTTGGTG GTTGGACGGT TTTCTTTTGG GGCTGGTTTT TGGGTTATGG CCCGATGATG GCAATATTTA TCGCTCGTAT CTCACGCGGT CGCACGATTC GTGAATTGAT TACGACCGTG TGCATTTTGG CGCCATTGGT TACCTGCTTT TGGTTCACGG TCATCGGCGG TTCGGGTCTT GCGTTTGAGA TTGCCAATCC TGGTAGTGTG AGTACAGCAT TTGAAGGCTT TAATCTTCCT GGAGCACTGC TTGCCATCAC TCAGCAGCTG CCATTTCCTT TGATTACTTC CTTATTGTTT ATCATTCTAA CCATGGTTTT CATTGTTACT ACTGGTGATT CGATGACCTA TACCATCAGT GTCGTGATCA GTGGTGAGAG AGAGCCAAAT GCTATCATTC GCACCTTTTG GGGCGTGATG ATGGGGGTGA CGGCGATTGT TCTTATCTCG CTTGGTGCAG GCGGCGTGAC AGCGTTGCAA TCCTTTATTG TCATTACGGC GGTGCCTGTC TCCTTTGTTT TGCTGCCATC ATTATGGAAT GGACCAAAAA TTGCGCAGCA GATGGCAAGG GATCAAGATC TTTATCGCCC TAATAGCGTG GAAACTGCTC ATCAACTCAT CGAAGAGCAG CTTGTCGAAA AAAGTATTGG TAAAGAAGTT GATTAG
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Protein sequence | MADLKGFNSK QHEQGRSHKT DKIADNLMHV ETPSDTLGLK NPAFWYSGGF IIAFVLMAIF AEERLGKLIN TGFSWSATVF GPFWQILLLA TFVIALAVGA GRTGRVILGN LAKPEMDGFK WMAILFCTLL AGGGVFWAAA EPIAHFVSAP PLYGESADIQ QRAFNALSQS FMHWGFLAWS IVGSLTAIVV MHLHYDKGLP LKPRTLLYPM FGERVLTGHT GAIIDACCIV AVAAGTIGPI GFLGLQTSYA LNTLFGIPDT FTTQLIIIIF AIALYTLSAI SGLARGMQLL SRFNVILAFG LMVFILMFGP TKFIVNGYIQ GVGTMVQNFI PMATYRGDEA WLGGWTVFFW GWFLGYGPMM AIFIARISRG RTIRELITTV CILAPLVTCF WFTVIGGSGL AFEIANPGSV STAFEGFNLP GALLAITQQL PFPLITSLLF IILTMVFIVT TGDSMTYTIS VVISGEREPN AIIRTFWGVM MGVTAIVLIS LGAGGVTALQ SFIVITAVPV SFVLLPSLWN GPKIAQQMAR DQDLYRPNSV ETAHQLIEEQ LVEKSIGKEV D
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