Gene Pcryo_1768 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_1768 
Symbol 
ID4034179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp2188869 
End bp2190191 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content49% 
IMG OID637974237 
Productmajor facilitator transporter 
Protein accessionYP_581029 
Protein GI93006592 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.071428 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAGTA TCTTTGCAAA CCGAACTTAT CGCCATTTAT TTGCCGCGCA AGTGATTGCT 
CTGATTGGCA CAGGTTTAGC TACTGTAGCG CTTGGGCTAC TAGCTTTTGA TTTGGCTGGT
AATAATGCTG GGGTCGTTAT GGGAACTGCA TTGGCCATCA AGATGGTTGC TTATGTTGGT
ATTGCACCAA TTGCAGCAGC CTTTGCCGAA CGGCTGCCCA AACGCACGAT GCTGGCAACG
CTGGACGTGA TACGAGCGGG TGTAGCACTG CTTTTACCAT TTGTCTCCCA GATTTGGGAG
GTTTACGTGC TGATCTTTGT ATTGCAATCT GCCTCAGCAG CATTCACGCC GACCTTTCAA
GCCACTATTC CTGATGTTCT GCCTGATGAA GCAGATTACA CCAAAGCCTT ATCGCTCTCA
CGCCTTGCGT ACGATATGGA GAGTCTGGTC AGTCCTATGT TAGCGGCAGC CTTGCTGACA
GTAATGAGCT TTCACAATCT GTTTACGGGA ACGGTGCTGG GATTTTTAGC GTCTGCCTTA
TTGGTCGTAT CGGTCACGCT ACCAGCGCAT GCTATGCCAG CGCGTCGTAG CATTTATGAT
AGAACCACAC GCGGTATTCG TATCTATTTA GCTACCCCTC GACTGCGCGG ATTACTCGCG
GTCAACGTTG CTGTGTCTGC CGCTGCGTCT ATGGTCTTTG TGAATACAGT GGTAATCATT
CAGGGTGGGA TGGGACTGAC TCAGAGCGCA GTCGCATTAG CATTGGCAAG CTTTGGTGCA
GGCTCTATGA TTGCTGCATT GGCTTTGCCA AGCCTACTGG TTAAGCTGAC AGACCGTAGG
GTCATGTTAA GCGGTGTAGG GTTGTTAGTG GTGGGTATGT TTGCTGGTAC ATTGATGATG
GGACAAAACT CGCTTATGGC CTTATGGTTC GTGCTAGGTT TGGGTTATTC TGCTGCCCAA
ACTCCCTCTG GACGCTTGCT ATGGCGATCC TCACATCAGG AAGATCGTCC TGCATTGTTT
GCCGCTCAGT TTGCTTTATC TCATGTGAGT TGGTTAGTAT TTTATCCTTT GGCTGGTTGG
CTAGGTGCTC GCTACAGTAT GACGGTAGCT TTTGCGGTAT TAGGCTGTGC TGCTGCACTA
GCAGTATGGG CGGCTTTTAG AGTCTGGCCG TCTATTGATT TAACAGAGAT TGAACACGAG
CATTCGGATT TGCCAGAAGG TCATGCTCAT GCTACTGGAT CTCCTACACC CAATGGGATA
CGTCATACCC ATCCTTTCGT AGTCGATGAC TATCATCCTC GTTGGCCAAG CTCAGGTCGT
TGA
 
Protein sequence
MLSIFANRTY RHLFAAQVIA LIGTGLATVA LGLLAFDLAG NNAGVVMGTA LAIKMVAYVG 
IAPIAAAFAE RLPKRTMLAT LDVIRAGVAL LLPFVSQIWE VYVLIFVLQS ASAAFTPTFQ
ATIPDVLPDE ADYTKALSLS RLAYDMESLV SPMLAAALLT VMSFHNLFTG TVLGFLASAL
LVVSVTLPAH AMPARRSIYD RTTRGIRIYL ATPRLRGLLA VNVAVSAAAS MVFVNTVVII
QGGMGLTQSA VALALASFGA GSMIAALALP SLLVKLTDRR VMLSGVGLLV VGMFAGTLMM
GQNSLMALWF VLGLGYSAAQ TPSGRLLWRS SHQEDRPALF AAQFALSHVS WLVFYPLAGW
LGARYSMTVA FAVLGCAAAL AVWAAFRVWP SIDLTEIEHE HSDLPEGHAH ATGSPTPNGI
RHTHPFVVDD YHPRWPSSGR