Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcryo_1768 |
Symbol | |
ID | 4034179 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter cryohalolentis K5 |
Kingdom | Bacteria |
Replicon accession | NC_007969 |
Strand | - |
Start bp | 2188869 |
End bp | 2190191 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637974237 |
Product | major facilitator transporter |
Protein accession | YP_581029 |
Protein GI | 93006592 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.071428 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTCAGTA TCTTTGCAAA CCGAACTTAT CGCCATTTAT TTGCCGCGCA AGTGATTGCT CTGATTGGCA CAGGTTTAGC TACTGTAGCG CTTGGGCTAC TAGCTTTTGA TTTGGCTGGT AATAATGCTG GGGTCGTTAT GGGAACTGCA TTGGCCATCA AGATGGTTGC TTATGTTGGT ATTGCACCAA TTGCAGCAGC CTTTGCCGAA CGGCTGCCCA AACGCACGAT GCTGGCAACG CTGGACGTGA TACGAGCGGG TGTAGCACTG CTTTTACCAT TTGTCTCCCA GATTTGGGAG GTTTACGTGC TGATCTTTGT ATTGCAATCT GCCTCAGCAG CATTCACGCC GACCTTTCAA GCCACTATTC CTGATGTTCT GCCTGATGAA GCAGATTACA CCAAAGCCTT ATCGCTCTCA CGCCTTGCGT ACGATATGGA GAGTCTGGTC AGTCCTATGT TAGCGGCAGC CTTGCTGACA GTAATGAGCT TTCACAATCT GTTTACGGGA ACGGTGCTGG GATTTTTAGC GTCTGCCTTA TTGGTCGTAT CGGTCACGCT ACCAGCGCAT GCTATGCCAG CGCGTCGTAG CATTTATGAT AGAACCACAC GCGGTATTCG TATCTATTTA GCTACCCCTC GACTGCGCGG ATTACTCGCG GTCAACGTTG CTGTGTCTGC CGCTGCGTCT ATGGTCTTTG TGAATACAGT GGTAATCATT CAGGGTGGGA TGGGACTGAC TCAGAGCGCA GTCGCATTAG CATTGGCAAG CTTTGGTGCA GGCTCTATGA TTGCTGCATT GGCTTTGCCA AGCCTACTGG TTAAGCTGAC AGACCGTAGG GTCATGTTAA GCGGTGTAGG GTTGTTAGTG GTGGGTATGT TTGCTGGTAC ATTGATGATG GGACAAAACT CGCTTATGGC CTTATGGTTC GTGCTAGGTT TGGGTTATTC TGCTGCCCAA ACTCCCTCTG GACGCTTGCT ATGGCGATCC TCACATCAGG AAGATCGTCC TGCATTGTTT GCCGCTCAGT TTGCTTTATC TCATGTGAGT TGGTTAGTAT TTTATCCTTT GGCTGGTTGG CTAGGTGCTC GCTACAGTAT GACGGTAGCT TTTGCGGTAT TAGGCTGTGC TGCTGCACTA GCAGTATGGG CGGCTTTTAG AGTCTGGCCG TCTATTGATT TAACAGAGAT TGAACACGAG CATTCGGATT TGCCAGAAGG TCATGCTCAT GCTACTGGAT CTCCTACACC CAATGGGATA CGTCATACCC ATCCTTTCGT AGTCGATGAC TATCATCCTC GTTGGCCAAG CTCAGGTCGT TGA
|
Protein sequence | MLSIFANRTY RHLFAAQVIA LIGTGLATVA LGLLAFDLAG NNAGVVMGTA LAIKMVAYVG IAPIAAAFAE RLPKRTMLAT LDVIRAGVAL LLPFVSQIWE VYVLIFVLQS ASAAFTPTFQ ATIPDVLPDE ADYTKALSLS RLAYDMESLV SPMLAAALLT VMSFHNLFTG TVLGFLASAL LVVSVTLPAH AMPARRSIYD RTTRGIRIYL ATPRLRGLLA VNVAVSAAAS MVFVNTVVII QGGMGLTQSA VALALASFGA GSMIAALALP SLLVKLTDRR VMLSGVGLLV VGMFAGTLMM GQNSLMALWF VLGLGYSAAQ TPSGRLLWRS SHQEDRPALF AAQFALSHVS WLVFYPLAGW LGARYSMTVA FAVLGCAAAL AVWAAFRVWP SIDLTEIEHE HSDLPEGHAH ATGSPTPNGI RHTHPFVVDD YHPRWPSSGR
|
| |