Gene Pcryo_1575 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_1575 
Symbol 
ID4035338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp1931850 
End bp1932686 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content43% 
IMG OID637974038 
ProductLysR family transcriptional regulator 
Protein accessionYP_580836 
Protein GI93006399 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.684291 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACAG GTAGTATTTC GGGTGCAGCA GAAAAGCTTT TTATTACTCA GCCTGCGGTC 
AGTAAACGCA TCAAAAACTT AGAAGATGAG TTTAATATCA CTTTATTTGA TACGGTGGGT
CGTGGTATTG TTCCAACTCA AGCAGCCAGT GAGATGTTAC CTCATGCCAA ACGATGGCTT
GAAGACTACG AAAACTTTAA AATCAATCTA CAGCACTCTA AGCATATTGT ATCCGGCAAA
CTTGTCATTG GTACTAGCCA TCATATAGGC TTACACCATC TCGCCCCTGT TCTTAAGCAT
TTTATCCAAG CGTATCCTGC CGTACAGCTA GAGGTACATT TCGTCGATTC AGAAACCGCA
CATAAAGCGG TACTTGATGG TGACTTGTCT CTAGCATTTT TGACCCTGCC ACCCGTTTAT
GACAAGCGTT TAACCTATCA TACCCTGTGG TCAGATCCAC TTTACTTTAT GACTGGTACC
TTATCACCTT TGGCCAGTAA GTCTAATGTG ACACTAGAGC AATTGGCACG TTACCCTGCT
ATCTTGCCAT CTGCCAATAC CTTTACCAGT CAAATTACCT TGGCTGAATT TGCCAAACAC
AATCTAAAGC CTTATGCCAC CATGAGCACC AACCCACTTG AATCTATTCG GATGCTGGTG
TCTGTAGGAC TTGGTTGGTC AGTATTGCCG CAAACGATGA TTAGCCAAGA CTTAGAGCGT
ATTGATATGG CAGATAATAT CGAATTACAG CGTCATTTAG GCGTGGTAAT CAACCCGAAA
CTGACCCAAT CAAACAGTGT AACTGCACTA TTAGATTTGC TAGCACCCAT TGAATAA
 
Protein sequence
MNTGSISGAA EKLFITQPAV SKRIKNLEDE FNITLFDTVG RGIVPTQAAS EMLPHAKRWL 
EDYENFKINL QHSKHIVSGK LVIGTSHHIG LHHLAPVLKH FIQAYPAVQL EVHFVDSETA
HKAVLDGDLS LAFLTLPPVY DKRLTYHTLW SDPLYFMTGT LSPLASKSNV TLEQLARYPA
ILPSANTFTS QITLAEFAKH NLKPYATMST NPLESIRMLV SVGLGWSVLP QTMISQDLER
IDMADNIELQ RHLGVVINPK LTQSNSVTAL LDLLAPIE