Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcryo_1575 |
Symbol | |
ID | 4035338 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter cryohalolentis K5 |
Kingdom | Bacteria |
Replicon accession | NC_007969 |
Strand | + |
Start bp | 1931850 |
End bp | 1932686 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637974038 |
Product | LysR family transcriptional regulator |
Protein accession | YP_580836 |
Protein GI | 93006399 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.684291 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATACAG GTAGTATTTC GGGTGCAGCA GAAAAGCTTT TTATTACTCA GCCTGCGGTC AGTAAACGCA TCAAAAACTT AGAAGATGAG TTTAATATCA CTTTATTTGA TACGGTGGGT CGTGGTATTG TTCCAACTCA AGCAGCCAGT GAGATGTTAC CTCATGCCAA ACGATGGCTT GAAGACTACG AAAACTTTAA AATCAATCTA CAGCACTCTA AGCATATTGT ATCCGGCAAA CTTGTCATTG GTACTAGCCA TCATATAGGC TTACACCATC TCGCCCCTGT TCTTAAGCAT TTTATCCAAG CGTATCCTGC CGTACAGCTA GAGGTACATT TCGTCGATTC AGAAACCGCA CATAAAGCGG TACTTGATGG TGACTTGTCT CTAGCATTTT TGACCCTGCC ACCCGTTTAT GACAAGCGTT TAACCTATCA TACCCTGTGG TCAGATCCAC TTTACTTTAT GACTGGTACC TTATCACCTT TGGCCAGTAA GTCTAATGTG ACACTAGAGC AATTGGCACG TTACCCTGCT ATCTTGCCAT CTGCCAATAC CTTTACCAGT CAAATTACCT TGGCTGAATT TGCCAAACAC AATCTAAAGC CTTATGCCAC CATGAGCACC AACCCACTTG AATCTATTCG GATGCTGGTG TCTGTAGGAC TTGGTTGGTC AGTATTGCCG CAAACGATGA TTAGCCAAGA CTTAGAGCGT ATTGATATGG CAGATAATAT CGAATTACAG CGTCATTTAG GCGTGGTAAT CAACCCGAAA CTGACCCAAT CAAACAGTGT AACTGCACTA TTAGATTTGC TAGCACCCAT TGAATAA
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Protein sequence | MNTGSISGAA EKLFITQPAV SKRIKNLEDE FNITLFDTVG RGIVPTQAAS EMLPHAKRWL EDYENFKINL QHSKHIVSGK LVIGTSHHIG LHHLAPVLKH FIQAYPAVQL EVHFVDSETA HKAVLDGDLS LAFLTLPPVY DKRLTYHTLW SDPLYFMTGT LSPLASKSNV TLEQLARYPA ILPSANTFTS QITLAEFAKH NLKPYATMST NPLESIRMLV SVGLGWSVLP QTMISQDLER IDMADNIELQ RHLGVVINPK LTQSNSVTAL LDLLAPIE
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