| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_1336 |
|---|
| Symbol | |
|---|
| ID | 4034537 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter cryohalolentis K5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007969 |
|---|
| Strand | + |
|---|
| Start bp | 1634896 |
|---|
| End bp | 1636065 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637973802 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_580601 |
|---|
| Protein GI | 93006164 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACTC AAAAATATAA TAAATATCTG GCATTTGCAC TATGCGTGAT AACGACAAGC
GTCAATATCC AAGGGCCGCT TTATGCTATT TATGCTAAAA ATGACGGCTA CGGTGTTTTA
GCAACCACGG TCGCATTTTC TTTTTATGTG TTGGGGGTGA TACCGGTATT ATTAGCTTTT
GGTGGACTCT CCGATAGGAT TGGGAGACGC AAGACGATTT TAATCTCTTT AGGTTTATCA
ATAGCGGCAA CTGCTCTGAT GATGTTCTAT CCTTATACGC GAGCGTTAGC AGTAGCGAGA
TTGTTGCTTG GTGTGGGTAC GGCATTAATG GCAGCAACAG CGACTGCATA TATGATTGAG
TTGATTGGCT TGTCCGATAC GGGGCGTGCT ACCACTTGGG TAACCGCAAG TACCACTATA
GGTTTTGGTC TTGGGCCTGC ATTAACGACA GTTGCTTTAT TGTTGTATGA GACACAGCAT
CCTATCAGCT TTTTCTTCCT GTTAATAAGC GCGTTTTTAT CAATATTTTT AGTATGGCGA
TTACCTGATA CTGCGCACGG GCGCTCGAAC ACTCTTGGAT CAATGCTCAA GCTGCCGTAT
TTTAATCGTG AAGTGATATG GTATGGCGGC GGTATTTTGA TTTGTTGGGC GACTACCGGA
TTGGTTTTAT CGATTATTCC GTCCGTACTA GCCACGCATG GACTGGCTAA GTATGCTGGA
ATATCCTCTA TGCTTGCCAT CAGCTGTGGA TTATTGTTTC AGCCTATCGC TCGAAAGCTT
GATCCCCAAG TATCAAGTAA GCTTGGTATT CTGATTTTAC TTCCTGCTTA TGCGTTGCTT
GCTTGGGGTG CGCTGCATGC CAATCTACTA GTAATTCTTT TAGCGGCTTT TTTAGCTAGC
AGTAGTTGTT ATGGCTTTGT TTATTTAGGC GGGTTATCAG GGGTGACACA GTCTGCTGGC
AATGAGCAAG CACGCGCCAG TGCTGGCTAT TTTTTAATGG CTTACATGGG GTTTAGCGTG
CCAGTGATTT TTACTGGTTT GATGGTAGAT CGGTATGGTT CTACTGTTGC ATTTTACGCT
TTCGGGTTGT TTTTACTGCT GGGCGCGTTT GTATTGTTCG CAAGTCAGTC TATTTTAAAA
CCAGAGTCCG CCACTATTGC AGCACCTTGA
|
|---|
| Protein sequence | MSTQKYNKYL AFALCVITTS VNIQGPLYAI YAKNDGYGVL ATTVAFSFYV LGVIPVLLAF
GGLSDRIGRR KTILISLGLS IAATALMMFY PYTRALAVAR LLLGVGTALM AATATAYMIE
LIGLSDTGRA TTWVTASTTI GFGLGPALTT VALLLYETQH PISFFFLLIS AFLSIFLVWR
LPDTAHGRSN TLGSMLKLPY FNREVIWYGG GILICWATTG LVLSIIPSVL ATHGLAKYAG
ISSMLAISCG LLFQPIARKL DPQVSSKLGI LILLPAYALL AWGALHANLL VILLAAFLAS
SSCYGFVYLG GLSGVTQSAG NEQARASAGY FLMAYMGFSV PVIFTGLMVD RYGSTVAFYA
FGLFLLLGAF VLFASQSILK PESATIAAP
|
|---|
| |