Gene Pcryo_1279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_1279 
Symbol 
ID4033919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp1552857 
End bp1554092 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content45% 
IMG OID637973744 
Producthypothetical protein 
Protein accessionYP_580544 
Protein GI93006107 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.406455 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTATT CTACGGTTCT CATCACTCAT GTGGTCAACG ATGCAGTTAT TGAAGGTTTT 
ATCCCCGCCT TATTGAAATC GAGGCACGTA CCTGACAGTC AATTGATTAT CATAACCGAT
GATAAAGAGG CACACATGGA TGCGTTAATA GCGACGCCTT TAGGGGCGCA AATCAGCATC
CTTGAATGCG ATGTATTTAA CCCTCTAGCG ATCATTGATA CCTTAAATAA TTATCATATC
CTGCCCAATC TCGTCTTTAG TAATAGCGAC CATCTACAAG CCGCAACCGC TGTGGTCGCT
GAATTTTTCC ATTTGCCTAG TAAAGACTGG CGTCACTGCT TGGTCTTTAA AGACAAGTAC
TTAATGAGAA CACAGCTGCA TTCTGCTCAC TTATATCAAG CCGGCTATCA GCTGCTAACC
GCCAAAGATT TACACCTTGA GAATCTCAGC ATCAGCTTTC CTCTGGTCGC TAAACCCAAG
CAAGGCGTCG CTAGCATGGA CGTTCAGCTT TGTATGAATA AAAACGAGCT GCTAAGCTAT
TGCCAAAGTT TTTGGCAGTC AAAAACCCTG CCTATTTTGG TTGAGTCCTA TGTGGCTGGG
CGCTTAATTA CGTTAGAGAC ACTCGGAGAT GGTGAGCGTT TGGTGGCGGT AGGCGGCTTT
GAGGTGACAT TGACCGAACC GCCACATTTT GTAGAGCTTG ATGCAGTTTG GAATACGCCT
TTATGTGTAC AGTACCGTGA GCGTTGTTTG GCGATTCTAC AAGATATCGG TGTGGGACTT
GGCGTCTGTC ACAGTGAGTT TATTATTACC CCAACGGGCG AGGTGCATTT GGTTGAAATC
AACTATCGCA GCATCGGCGA TGGTAGAGAG TTTCTATTAC ATGATATGGC GCACTACCCT
TGGTTTGATA CCATTGTTAG ATTGCATCAA GGGGTCAGCA TTGCTGAATT AGAGGCCGAG
TTCGGACAGC TCGCCATCAG TACGCATGCA CGCATTCATT ACATTGTTGC ACCTCAATCT
GGCACCATTT GCATAGCACC TAGCCCATTT AATAAGCAAA TGCAGCAGAC GACCATTATC
CATCAGCCCC TAAAAAAACA ACATCAAACC ATTCATATTA CCCACTCTAA TAAAGACTAT
CTGAGCCGAC TACTGGCTTA TTCCGATTGC GCGAACACTA TGAATGACGT ACTAAACGAT
GCCATAGCAA ATTTGCAATG GCAGTTTGAA TCCTAG
 
Protein sequence
MTYSTVLITH VVNDAVIEGF IPALLKSRHV PDSQLIIITD DKEAHMDALI ATPLGAQISI 
LECDVFNPLA IIDTLNNYHI LPNLVFSNSD HLQAATAVVA EFFHLPSKDW RHCLVFKDKY
LMRTQLHSAH LYQAGYQLLT AKDLHLENLS ISFPLVAKPK QGVASMDVQL CMNKNELLSY
CQSFWQSKTL PILVESYVAG RLITLETLGD GERLVAVGGF EVTLTEPPHF VELDAVWNTP
LCVQYRERCL AILQDIGVGL GVCHSEFIIT PTGEVHLVEI NYRSIGDGRE FLLHDMAHYP
WFDTIVRLHQ GVSIAELEAE FGQLAISTHA RIHYIVAPQS GTICIAPSPF NKQMQQTTII
HQPLKKQHQT IHITHSNKDY LSRLLAYSDC ANTMNDVLND AIANLQWQFE S