Gene Pcryo_1249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_1249 
Symbol 
ID4034278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp1521012 
End bp1521413 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content46% 
IMG OID637973714 
Productbiopolymer transport protein ExbD/TolR 
Protein accessionYP_580514 
Protein GI93006077 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.368012 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTCC ATCTAGGTGA TGAAGAGACC CAAGGTATGA GCGAGATGAA TCTCATTCCG 
CTCATTGATA TTATGCTGGT GCTGATGATT ATCTTTTTGG TCACAGCCAC AGTGATGAAT
CCAACCGTAC CACTAGATCT GCCCGATACC AATGCCACAG TAAGCGGCTT GCCTGATGAG
ATATTGCAAA TAAGCATTGA TAAAGACAAT GGTCTATTTT TGGATGAGGA AGCGCTGACG
TTAGCGCAAT TGCGATTGCG GCTTGAAGAA GCGTCAAAAG ACGGTGCTAA TCCGAATATT
CATCTGCGGG CAGATCAAGA CACCCGTTAT GATATGGTGG CGCAAGTGCT GGCTGCCGCC
AGTACTGCGG GTTTGACTAA GGTTGCTTTT GTCACTGAAT AA
 
Protein sequence
MAFHLGDEET QGMSEMNLIP LIDIMLVLMI IFLVTATVMN PTVPLDLPDT NATVSGLPDE 
ILQISIDKDN GLFLDEEALT LAQLRLRLEE ASKDGANPNI HLRADQDTRY DMVAQVLAAA
STAGLTKVAF VTE