Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcryo_1224 |
Symbol | |
ID | 4035056 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter cryohalolentis K5 |
Kingdom | Bacteria |
Replicon accession | NC_007969 |
Strand | + |
Start bp | 1483631 |
End bp | 1485322 |
Gene Length | 1692 bp |
Protein Length | 563 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637973689 |
Product | periplasmic sensor signal transduction histidine kinase |
Protein accession | YP_580489 |
Protein GI | 93006052 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.600367 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.164924 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGAAG CTGCCCAAAA TCCTACAGCG ATAAACAAAT CGAAGCTGAG CATACCTGTG TCGCTATTTT GGCGACTCTT TTTGAGTTTG CTATTTATGA TTCTGATCAC TTCTATCTTA TCTATAGCAG TAGAGCGCTG GCTTAATGAG CGAGAGCTTG CTAATCGTAT GGATTCTCAA ATTGATAAGC TGCTTATTCA GCGTGAGCGG CTGGTCATAT CCTTGGAAGC GGGTGACTTA TCTACTGTAA AGCAGATTTA TAACGAAGAT CGAAGACTCA TGAGCCAAAT CAGGATATAC GATGAGCAGG GCGCTATTAT ATTTCCAAGA TATCGGTTTC GAGAAAATCG TGTCAAGCGG CGTCAAGCAC GTGACGTGGC AAGTATAAAG GCAATAGACT TGCAGATAGA AGGTGAGCAA TCATCTGTAC CACTGAATAT GCACAATTCT GTGAGTAGCA GTACTGACAA TAAAACATCT GATTATCATG AAATTAGTGA TAAAGAGCGT GTCGATAAGA ACCCTTATAG GGCGTATTCC TTTGATAAGG ATGGCGTCAA AAGCGCGCAC CCAAATAATA AACCTTTTAG CCTCGATGAT ATTTTAAAAC CAATGCCGTC TCATAAAGCC ATTGCTGACA TTGATAGCCG ACCTGAGTTA GCTGAGGTTA CAGTGGTTAT GCCAAATAAT GACAGCGTTA TCATACAGCT GCGTCCGCAC CTATTATTTA AAGATGTGTT AGAGCTACAG CGGGGCAATT TTATGCTGCG GCTCTTGCTG ATTATACTCT TTAGCGTGTT GGTGTGCTTT TGGCTCAGTC GTACGTTGAC TCGGCGTATT GGGCGTGTGC AGGATACCGT ACACCGGATG ATAGATGGCA ACTATGAAGT CAATCCGCAG TTATCAAGTC TGGGTTCTGA CGAATTGGGG TTATTAGCAA AAGATGTCGC TTTACTATCA ACGCGGCTCG CTGACAGTGA GCTGGCACGC AAGCAGATGT TAAGTGATAT CTCGCATGAG CTGCGCTCGC CGCTGGCCCG TCTCGATGTA GCGACTGAGC TGACACGAGA TTTTGCGCCC AACGCCAGTC GTTATCTTGA CCGTATCGAT AAAGAGTCAA CGCGGATGAA TGAGCTGATT GAGCAAATTA TCCGTATTCA ATCGTTGCAA ATGCAGCAAT ATACCGTCGA CACTCTAGAA AATGAGGCAG TAGACATCTG TGAAATTATC AATGAGATTG GTCAAGATGT CTGTTTTGAG TTTCAGCATA AAAATATATA TTGGCAATGG CATGTGAATC CGTCTTTATT GCCAGATTCT TGCACAGTAA TGGGCAATCA AGAACAGCTG CATAGTGCCC TTGAAAATAT CATCCGTAAT GCTTTTATGC ATACTGCTTT TGATTCGGCA GTGATGGCTG AGATACAAGC AGTGAAGATG AATAATAAAA TGTCAGCTAT TGAAATAAGC ATCACTGACG AGGGGGGCGG TGTTGCAGAA CAGGATCTGG AGCGTATTTT TCAGCCTTTC GTTAGGCTTG ATACGGCGCG CCATCGCGAA ACGGGCGGTT ATGGACTGGG GTTGGCAATC GTCCATGCCG TAGTGATGGC ACATAGAGGT CAGATCACTG TCCATAATCG CCAAGATGGT ATATTGGGGC TTGTGATAAA AGTAATACTA CCTATTAAAT AG
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Protein sequence | MTEAAQNPTA INKSKLSIPV SLFWRLFLSL LFMILITSIL SIAVERWLNE RELANRMDSQ IDKLLIQRER LVISLEAGDL STVKQIYNED RRLMSQIRIY DEQGAIIFPR YRFRENRVKR RQARDVASIK AIDLQIEGEQ SSVPLNMHNS VSSSTDNKTS DYHEISDKER VDKNPYRAYS FDKDGVKSAH PNNKPFSLDD ILKPMPSHKA IADIDSRPEL AEVTVVMPNN DSVIIQLRPH LLFKDVLELQ RGNFMLRLLL IILFSVLVCF WLSRTLTRRI GRVQDTVHRM IDGNYEVNPQ LSSLGSDELG LLAKDVALLS TRLADSELAR KQMLSDISHE LRSPLARLDV ATELTRDFAP NASRYLDRID KESTRMNELI EQIIRIQSLQ MQQYTVDTLE NEAVDICEII NEIGQDVCFE FQHKNIYWQW HVNPSLLPDS CTVMGNQEQL HSALENIIRN AFMHTAFDSA VMAEIQAVKM NNKMSAIEIS ITDEGGGVAE QDLERIFQPF VRLDTARHRE TGGYGLGLAI VHAVVMAHRG QITVHNRQDG ILGLVIKVIL PIK
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