| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_0972 |
|---|
| Symbol | |
|---|
| ID | 4035983 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter cryohalolentis K5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007969 |
|---|
| Strand | - |
|---|
| Start bp | 1158520 |
|---|
| End bp | 1159338 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637973436 |
|---|
| Product | putative sterol desaturase |
|---|
| Protein accession | YP_580237 |
|---|
| Protein GI | 93005800 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG3000] Sterol desaturase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.00895829 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAATG AGATGTGGTG GCGTTTGGGC TTTTTCTTTA GCATATTGGT CATTATGATG
CTCATTGAGC ATAGGCATCC CGCACGTCAA TCACCAATTA AGAGTAGCAC ACGTTGGTTT
GCTAATCTTG GATTGGTATT TGCCTCTTCT TTTGTTGCGC GTTTGGCAGT CCCCATTGGG
CTGACAACGG TCGCCATTTA TAATCAAGAA AACGGTATCG GTTTATTTAA TTTAATTGAG
ATACCGAATA TCGCGGCTAT TATTTTAAGC TTATTGTTGC TTGATATGGT TATCTACTGG
CAGCATCGTT TATTTCATCG AGTGCCGATT CTCTGGCGCT TGCACCGTGT CCATCACGCT
GATTCGCATA TCGATGCCAG CACTGGGCTT AGATTTCATC CTATCGAAAT TGTCTTAAGC
ATATTGCTTA AGCTTGTTGT CATTAGTGTG CTTGGTGTCC CTGCTATCGT GGTACTTATA
TTCGAGATTG CCTTAAATGG GTTGGCTATG TTTAATCATG CCAATATTCG TCTGCCACCA
GTGATTGAGA AGCCTTTACG CATGATTCTA GTCACGCAAG TCTTACACCG TATTCATCAC
AGCCAACGGG CCAGTGAGAC CAACTCCAAT TATGGCTTTA GTGTGACTTG GTGGGATTGG
CTTTTTGGTA GTTATAAAAG CCAAGGATTC AAACCTGATC AAGCATTAGA TATTGGTTTA
AAAGAGTATC CCGATGCCAA GCAAAATGCC TCGCTATGGG GATTGTTGCT CATGCCTTTT
AAAAATAAAC CTTCTATAAA TCAATCCAAT CAAAAATAA
|
|---|
| Protein sequence | MANEMWWRLG FFFSILVIMM LIEHRHPARQ SPIKSSTRWF ANLGLVFASS FVARLAVPIG
LTTVAIYNQE NGIGLFNLIE IPNIAAIILS LLLLDMVIYW QHRLFHRVPI LWRLHRVHHA
DSHIDASTGL RFHPIEIVLS ILLKLVVISV LGVPAIVVLI FEIALNGLAM FNHANIRLPP
VIEKPLRMIL VTQVLHRIHH SQRASETNSN YGFSVTWWDW LFGSYKSQGF KPDQALDIGL
KEYPDAKQNA SLWGLLLMPF KNKPSINQSN QK
|
|---|
| |