Gene Pcryo_0900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_0900 
Symbol 
ID4034039 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp1066588 
End bp1067841 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content41% 
IMG OID637973363 
ProductFAD dependent oxidoreductase 
Protein accessionYP_580165 
Protein GI93005728 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTATG ACGTTATTGT GATTGGTGCC GGCATAGTAG GAACCTCTAT TGCTTGGCAT 
CTGCAGAAAA ACAATGCTCA AGTTCTCTTG CTAGATAAAA AATGCCCAGG AGAAGAAACT
TCCTATGGTA ATGCCGGTAT CATTACAAGA GAGGCGGTAA ATACAAAACC GTTCCCTAGA
AGTTTTAAAG AAATATCTAG AGTATTACCC AATAAAAGTG CTGATATTCG ATACCGTTGG
TCTGCAATAT ATCGTCTTCA GCGCCCGTTA TTACAGTATT GGATTCACTC AAGTCCAAAA
AACGTTGAAG AGATTGATGA CGAGTGGGCT ACGCTTATTC AGCATTGCAC AGACGAGCAT
GAGCCTATGA TTAGAGCGTC AGGCGCTGAT GAACTGGTCA GTAAAATAGG TTGGATTGAG
CTTCATTGTA AATCAAGTAG TTTTGAAAAA TCCATTAATA AAGCGGTAAA AGCGGCGGAT
AAAGGCGTGG AGTATCAGGT TCTATCGCTA GCAGAGCTCC AAGCGCTAGA GCCAAATGTG
AACTTTACAG ATTATGTCGG TGGTATACAC TGGAAAAACT CTTGGCAGAT AAAAAATCCC
GGCAGTCTTG TGAAAGCATA TGCTAAAAAT TTTGAAGCAA TGGCAGGAGA AATAAAACAA
TCCACCGTAA AAAATATGAT ACAGACAGAA GAGGGCTGGC AGGTCATTAC CGATAGCGGA
ACCTACCTAT GTCAGAATTT GGTCATTGCT GCTGGTCCTT GGTCAGCTGA TCTTATTAAA
CCATTGGGTT ATAAAATTCC TCTATTTCCT ATGCGTGGCT ACCATCAACA CTTTAAAAGC
ACCGACCAAA ACGCATTTTC TCACAGCTTA TTTGATGTAG ATAAAGGGTT TGTGATGGGC
ACAATGGATC AAGGCGTGAG AATCACGACT GGCGCTGAAA TGGCATTGTT AGATGATCCA
AAAGATTTTA ATCAGTTAGA GACTGTACTG ACTTTTGCAA AAAAAGTGTT GCCGCTTGAT
GCTGCTGTTG AATCTGAAGC ATGGTGTGGG ACAAGACCAT GCATGCCAGA CATGAAGCCA
GTTATTGGGC CTGCATCAAA ACACGATAAT TTATGGTTTT CTTTTGGTCA TGCTCATCAA
GGTCTGACAC TTGGACCGGT GACAGGGCGT CTCATTGAAG AGATGATTCA TGGTAAGCCA
TTATTTATTG ATGCTCAGCC GTTTAGTAGT AAACGCTTTG ATTCGAATCT TTAA
 
Protein sequence
MRYDVIVIGA GIVGTSIAWH LQKNNAQVLL LDKKCPGEET SYGNAGIITR EAVNTKPFPR 
SFKEISRVLP NKSADIRYRW SAIYRLQRPL LQYWIHSSPK NVEEIDDEWA TLIQHCTDEH
EPMIRASGAD ELVSKIGWIE LHCKSSSFEK SINKAVKAAD KGVEYQVLSL AELQALEPNV
NFTDYVGGIH WKNSWQIKNP GSLVKAYAKN FEAMAGEIKQ STVKNMIQTE EGWQVITDSG
TYLCQNLVIA AGPWSADLIK PLGYKIPLFP MRGYHQHFKS TDQNAFSHSL FDVDKGFVMG
TMDQGVRITT GAEMALLDDP KDFNQLETVL TFAKKVLPLD AAVESEAWCG TRPCMPDMKP
VIGPASKHDN LWFSFGHAHQ GLTLGPVTGR LIEEMIHGKP LFIDAQPFSS KRFDSNL