| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_0872 |
|---|
| Symbol | |
|---|
| ID | 4035308 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter cryohalolentis K5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007969 |
|---|
| Strand | + |
|---|
| Start bp | 1031409 |
|---|
| End bp | 1031981 |
|---|
| Gene Length | 573 bp |
|---|
| Protein Length | 190 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637973335 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_580137 |
|---|
| Protein GI | 93005700 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.956466 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGCTG AAAACGCGCA TAAGCGCAAA AAACAACCAG AAGTAGTACG TCGGGCATTA
CTCGACCAAG CGGCACGCAT TACTTTAGAG CAAGGTTTGG CCAAGGTGAC CTTCCAAGCG
GTTGCTGATG CAGTCGGAGT AACTAAAGGC GGCGTGATGC ATCATTTCAC CACCAAAAAC
GCGTTGGTCA TGGAAGTATT TCATGACGCG ATGAAAAAGT TTGAGGTGGA AGTTGACTCG
GCTATGGCAA AAGACCCAGT GCGTTTTGGC TCCTTTACCC GTGCTTATAT CAATGCCACG
ATTAGCTTGG GCGAAAAAGG GCAGCATGAG TTCAATAGCC AAGCGACATT ATATGCATTG
ATGCTAGGCG ATAGTGAGCT ACGTGACTTA TGGGCAGAGT GGGCAAATGC ACAATTAAAG
AAACATGAAG CAACCGACAA TACCGAAACA TTATGTATGG TGCGTTTAGT CGCTGATGGT
ATTTGGCTCT CTGATTTTTC AGGAATCAAT ATCTCAGATA AAGCATCTAT TCATAAACGC
TTGATAAGCA TGACGCAATC TGAGAAAGAG TAA
|
|---|
| Protein sequence | MEAENAHKRK KQPEVVRRAL LDQAARITLE QGLAKVTFQA VADAVGVTKG GVMHHFTTKN
ALVMEVFHDA MKKFEVEVDS AMAKDPVRFG SFTRAYINAT ISLGEKGQHE FNSQATLYAL
MLGDSELRDL WAEWANAQLK KHEATDNTET LCMVRLVADG IWLSDFSGIN ISDKASIHKR
LISMTQSEKE
|
|---|
| |