Gene Pcryo_0198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_0198 
Symbol 
ID4035678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp233837 
End bp235063 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content47% 
IMG OID637972644 
Producttryptophan synthase subunit beta 
Protein accessionYP_579466 
Protein GI93005029 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0133] Tryptophan synthase beta chain 
TIGRFAM ID[TIGR00263] tryptophan synthase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACGC AAAATACCGC CACTGGCTAC GGTTTACATC AATCAATTTT GCCCAATGAC 
GATGGTCTAT ATGGTGAGTT CGGTGGCAAA ATCGGTCATC CTGAGCTTGC CAAAGCCATG
GCAGAAATCG AAGTGGGCTT TCGTGAAATC ATTAAAAATG ACGATTTTAT CGCTGAGATG
AAGCGCTTGC GTGAGACCTA TGTTGGTCGT CCAAGTCCTA TTTATCATGC ACAGCGTTTG
ACCGAGCATT GCGGAGGCGC GCAGATTTAT TTTAAGCGTG AAGATTTAAA TCATACGGGT
GCGCATAAGA TTAATCACTG TTTGGGTGAA GTATTATTAG CCAAGAAATT AGGCAAAACC
AAAGTGATTG CCGAAACGGG CGCGGGGCAA CATGGCGTAG CATTGGCAAC GGCAGCGGCA
TTGATGGGCT TGGAATGTGA GATTCACATG GGTGTGGTCG ATATTAAAAA AGAGCATCCA
AACGTCAGTC GTATGAAGAT TTTGGGTGCC AATATCGTGC CAGTCTCGCG CGGTGCTGGT
ACGCTAAAAG AAGCGGTTGA TAGTGCTTTT GAGACTTATT TGGATGAGCT TGATAGCAGT
ATGTTCGCGA TTGGCTCGGC ACTGGGACCT GCGCCCTACC CTGAAATGGT CAGCTATTTT
CAGTCAGTGG TTGGTCATGA AGCGCGGGCG CAGTTCTTAG CGACGACGGG TAAGCTACCT
AATAAAGTGG TTGCTTGTAT TGGCGGCGGC TCTAATGCTA TCGGTATGTT TAGCGGCTTT
TTTGATGATA AAGATGTAGA AAAAATAGGC GTGGAACCCG CAGGCGAAGG TCTGGATACT
CCTAATCATG CGGCGACAAT GTCGCTCGGC GTGAAAGGTG AGATTCATGG TTTTAAATGC
TATGTGCTGC TCGATGAAAA AGGCGAGCCA GCTCCCGTAC ATTCGATTGC CTCCGGTCTT
GATTATCCTG GGGTTGGACC ACAGCACTCA CATCTGCGAG ATTTAAAACT GGCCACTTAT
GAGTCGGCGA CTGATGCTGA ATGTCTAGAA GCGTTTATGG CATTGTCGCG CCTTGAGGGT
ATTATTCCTG CTTTAGAGTC GGCACATGCC ATCGCTTATG CGATGAAAAT CGCCAAGGAT
ATGTCAGCGG ATGAGACGAT TTTGGTCAAT TTGTCAGGGC GTGGCGATAA AGACATCGAT
TTTATTTTGG ACAAGGTGGA TTTATAA
 
Protein sequence
MTTQNTATGY GLHQSILPND DGLYGEFGGK IGHPELAKAM AEIEVGFREI IKNDDFIAEM 
KRLRETYVGR PSPIYHAQRL TEHCGGAQIY FKREDLNHTG AHKINHCLGE VLLAKKLGKT
KVIAETGAGQ HGVALATAAA LMGLECEIHM GVVDIKKEHP NVSRMKILGA NIVPVSRGAG
TLKEAVDSAF ETYLDELDSS MFAIGSALGP APYPEMVSYF QSVVGHEARA QFLATTGKLP
NKVVACIGGG SNAIGMFSGF FDDKDVEKIG VEPAGEGLDT PNHAATMSLG VKGEIHGFKC
YVLLDEKGEP APVHSIASGL DYPGVGPQHS HLRDLKLATY ESATDAECLE AFMALSRLEG
IIPALESAHA IAYAMKIAKD MSADETILVN LSGRGDKDID FILDKVDL