| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3977 |
|---|
| Symbol | |
|---|
| ID | 4030887 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | + |
|---|
| Start bp | 4348142 |
|---|
| End bp | 4348993 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637972337 |
|---|
| Product | extradiol ring-cleavage dioxygenase III subunit B |
|---|
| Protein accession | YP_579111 |
|---|
| Protein GI | 92119382 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3384] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAAA TGCCTGTTCT GTTCATCGGA CATGGAAGTC CGATGAACAC GCTTGAACGG
AATGGCTTCA CCGAGGCTTG GCGGGCGTTC GGGCAGCATC TTCCCCGACC GAGGGCGCTA
CTCGTCGTTT CCGCGCATTG GCTCTTCGGC GCCACAGCCG TGACGGCAAT GCCCAGGCCG
AGAACGATTC ACGACTTTTA CGGCTTCCCG TGGCAGCTCT CCGAGTTCGA TTACCCGGCC
CTTGGCGCCC CCGATCTGGC GCATGAGATC GTCGAACTGG TCAAGCCTAA CTGGGTCGGG
CTTGATCGCG ATCAATGGGG GCTCGATCAT GGCACATGGT CCGTGCTGGC GCACGTCTAT
CCAGACGCGG ATATTCCCGT GGTGCAGCTC TCGATCAACG CGCTGAAGTC CCTCGACTAC
CATCTCGACC TTGCGGCAAA ACTCGATGCG CTCAGAAGCC GAGGTATCAT GATCGTCGCC
AGCGGGAACG TCGTTCACAA CCTCCAACGG CTTCAATGGG ACCAGCAAAA CTTGGCGTAT
GACTGGGCCG AACGGTTCGA CGACGCCGTC GTCGAACAAC TCGGGCGCGA GCCGGGCGAT
GTCCTGCGTT TGCTCGAACA CCGCGACTAT AAACTGGCGG TGCCCACGCC TGATCATTTC
ATCCCATTGC TCTATCTCGC CGGTCTGGCG GCTGCAGACA AGATAAAGCC AGAGCCGTTG
GTACGAGGTT ATTCCATGGG GTCGATCTCT ATGACCTGCT TCGGGCTGGG GGCGGAAATA
GAACTGCGCA AGGATGCAAC CTGCGCGGCC AAACTTCCCC CCGAAGTACC GCCCGACCAG
ACGAATATGT GA
|
|---|
| Protein sequence | MSKMPVLFIG HGSPMNTLER NGFTEAWRAF GQHLPRPRAL LVVSAHWLFG ATAVTAMPRP
RTIHDFYGFP WQLSEFDYPA LGAPDLAHEI VELVKPNWVG LDRDQWGLDH GTWSVLAHVY
PDADIPVVQL SINALKSLDY HLDLAAKLDA LRSRGIMIVA SGNVVHNLQR LQWDQQNLAY
DWAERFDDAV VEQLGREPGD VLRLLEHRDY KLAVPTPDHF IPLLYLAGLA AADKIKPEPL
VRGYSMGSIS MTCFGLGAEI ELRKDATCAA KLPPEVPPDQ TNM
|
|---|
| |