| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3960 |
|---|
| Symbol | |
|---|
| ID | 4031708 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | + |
|---|
| Start bp | 4332557 |
|---|
| End bp | 4333036 |
|---|
| Gene Length | 480 bp |
|---|
| Protein Length | 159 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637972323 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_579097 |
|---|
| Protein GI | 92119368 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5478] Predicted small integral membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.105111 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGAGA AAGCCAAGCC GAAGAAAAAG GGAAGCGCCG CGGAGGAAAA GGGTGGTTTT
GGCCGGGTCT TCGGTGATGT CGCCAACAAG ACATCGCAGG CCGCAGGTCG GGCATCGACT
TTTATCCTTG CCGCGGGTGT TGTTGCCGTC TGGGCGATAA CTGGCCCATT GTTCGGCTTC
TCCGATACCT GGCAGTTGGT CATTAACACA GGCACAACCA TCGTTACGTT CTTGATGGTC
TTTCTTATTC AGAACTCGCA AAACAGGGAT GGCGCGGCCA TTCAGGTGAA GCTTGATGAG
CTCATCCGCG TCGGCGCTGC ACACAACTCC CTTATCGGAA TCGAGCATCT TACCGATGAC
GAACTCGAAG ATCTCCGCAC CAAGTGCGAA GCGCGCGCCG AGGCCGAGAG GGGTGGTGAG
GAAACTGTGA AGGAAACCGG AAGAAAAGCG CGGAAGGCGG CCGTGCAGGC GGCCAACTAA
|
|---|
| Protein sequence | MAEKAKPKKK GSAAEEKGGF GRVFGDVANK TSQAAGRAST FILAAGVVAV WAITGPLFGF
SDTWQLVINT GTTIVTFLMV FLIQNSQNRD GAAIQVKLDE LIRVGAAHNS LIGIEHLTDD
ELEDLRTKCE ARAEAERGGE ETVKETGRKA RKAAVQAAN
|
|---|
| |