Gene Nham_3945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3945 
Symbol 
ID4031966 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp4321463 
End bp4321900 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content61% 
IMG OID637972311 
Producttransposase 
Protein accessionYP_579085 
Protein GI92119356 
COG category[L] Replication, recombination and repair 
COG ID[COG4584] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAATTAT ATCTGAAGGT TCGTCTGGCC TGTTCTGAAG GAATGAGCCG GCGTCAGGCT 
GCAAAGCATT TCAACATATC GCGCGATAGC GTGGCCAAGA TGATGTCGTA TTCGACGCCG
CCGGGCTATC AGCGTCAGTC ACCGATCCAG CGGCCTAAGC TGGATGCGTT TGTTTCGACG
ATCGATCACT GGCTTGATGA GGACATGACG GTGCCGCGCA AGCAGCGCCA TACGGCCAAG
CGGGTGTTCG ACCGTCTTCG GGGCGAGTGC GGGTTCACGG GCGGCTACAC GATCATCAAG
GATTACATGC GCGAGCGGGA TCAGCATCGC CAGGAGGTGT TCGTGCCGCT GGCGCATCCG
CCAGGGCATG CGCGGGCTAC GGACCCGTCT GCACTGGCAA CGCATAGAGG AGGAAGCGCG
TTCCCGCGGC GAGGGTGA
 
Protein sequence
MELYLKVRLA CSEGMSRRQA AKHFNISRDS VAKMMSYSTP PGYQRQSPIQ RPKLDAFVST 
IDHWLDEDMT VPRKQRHTAK RVFDRLRGEC GFTGGYTIIK DYMRERDQHR QEVFVPLAHP
PGHARATDPS ALATHRGGSA FPRRG