| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3901 |
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| Symbol | |
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| ID | 4032657 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 4279188 |
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| End bp | 4281257 |
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| Gene Length | 2070 bp |
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| Protein Length | 689 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637972279 |
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| Product | recombinase |
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| Protein accession | YP_579053 |
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| Protein GI | 92119324 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1961] Site-specific recombinases, DNA invertase Pin homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATCA CGCCTGATCA TCTGGCGCGG GGCGCCTTCA TCTACATTCG ACAATCCACG
GTCGACCAGC TTGCCAACAA TCATGAGAGC CGACGACGTC AATATGGCCT TGCCGACCGT
GCCCGTGCTC TCGGTTGGAC GGATGTGACA GTCATTGATG ACGATCTTGG TCGGTCGGGT
TCGGGCGTCA GCCGTCCGGG CTTCGAGAGG CTGCTTGCAG CGATCTGTGA AGGCCGCGTT
GGTGCCGTGT TTGCTATCGA GGCGTCGCGC CTGGCGCGCA ATGGACGCGA CTGGCACACC
CTGATCGAAT TTTGCGGCTT GGTCGGCACG GTGATCGTCG ATGAGGATGG AACGTATGAA
CCACGCCATC CAAACGACCG GCTGTTGCTG GGCATGAAAG GGACGATGAG CGAGCTCGAA
CTATCGCTGC TGCGGGCCCG TTCGATGGAA GCCCTGAAGC AGAAGGCACG ACGGGGCGAG
CTGTTCTTCT CGGTAGCCGT TGGCTATGTA AAAGTGGGCC GCGACAAAAT CGAAATGGAT
CCCGACCTGC GCGTGCGTGA GGCGATTGGG CTGGTCTTCA CCCGGTTTGC CGAGATGCAA
AGCATCCGCC AAGTGTTTTT GTCGCTTCGT GGTGACCAGA TCGCGCTGCC GTATATCGAC
CCCAAAGTCT CGGGACAACA TCATGTGCTG TGGAAGCTAC CGGTCTACAC GACGGTGAGC
AATCTTCTCA CCAACCCTGT TTATGCCGGT GCTTACGCCT TTGGCCGAAC CGGAAGCCGG
ATGACAATCG AAAATGGCCG CAAACGAATC GTTCGCGGCC GCCGCAAAGA TCGCTCAGAT
TGGGCGGTCT TGCTCGTCGA CCATCACGAG GGGTATTTGT CCTGGGCAGA CTTTGAAAGG
AATCAACGGC TGATCGCTGA CAACGCCAAT GGTAAGGGCA TGATGGTGCG CGGACCAGTG
CGCAAGGGGG AGGCTTTACT CACCGGCCTG CTACGCTGTG GTCATTGCGG CCGCCGGCTG
CTTGTCAGCT ACAATGGCAC CAAGGGCGAT GTCGGTCGCT ATAATTGTGA CGCGACCCGG
AGCAATCCCG GTGCTGCTCC CTGTATCTCG TTCGGCGCTC TGCGGGTCGA TGAGGCGGTG
GGAGCCGAGA TTGTGCGGTT GCTGCAACCG CTCGGTGTTG AAGCGGCCAT CCAGGCGATC
ACGCAATGCG AGCACCAGTC TGGCGAAAAA CAACGCCAGG TCGAGTTGGC GCTCGAACAG
GTGCGATACG AGGCAACCAG GGCACGCCGA CAGTATGACA CGGTCGACCC TGATAATCGT
CTGGTCGCTG GTGAACTCGA GCGACGGTGG AATGCCGCCC TTGCGGCCGT ACGCGCACTC
GAGGAGGAAC TGGAGGCGCT GCTTCGACAG CGGCCGGCGA CCTTGGGTGC AGAGGAGCGC
AAGCGTCTGT TGCAAATGGG GGCTGATCTG GAGGCCGCTT GGCACCATCC GGCGGCCACT
GCCGTCACGC GTAAGCGTAT CATCCGGGTC GTGTTGCGTG AGGTGGTAGC CTGCGTCGAG
GATGACCAGA TTCATTTATT GTTGCATTGG CAGGGCGGCG ATCATACCCG CTTGATGGTG
AGAAAGAACC GGAGGGGGCA AACACGGTGG GCCGTCGAGC CCGAGACGGT GGAATTGATC
CGCGCCTGCG CGCGATTGAT GCCTGACAAA GCCATTGCCG GCATGCTCAA CCGGACAGGT
AAGCGAACAG GCCGATTGAA TGGATGGACA CAGTCGCGTG TGCGGGGCTT CCGCAACACG
CACGGCATCA CGGTCTACAG GGATAGCGAA TGGGCCGAGC GCGGCGAAGT CACGTTGCCT
GAAGCAGCCA GGATGCTCAA TCTGAGCCCC CTGGCGGTGC TACGCCAGAT TCGCGCCGGC
GGCATTCCCG CCAAGCAATA TTATGCAGGC GCACCTTGGG TAATCAAACG ACGGGATATC
AAAGATCCGC ATGTGATCGA GCGCGTCAGG GCGTGCTGCA AAAGCCCGTC ATCATCAAAT
CCAAATCAAA AGACCTTTGT CTTTCAATAA
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| Protein sequence | MKITPDHLAR GAFIYIRQST VDQLANNHES RRRQYGLADR ARALGWTDVT VIDDDLGRSG
SGVSRPGFER LLAAICEGRV GAVFAIEASR LARNGRDWHT LIEFCGLVGT VIVDEDGTYE
PRHPNDRLLL GMKGTMSELE LSLLRARSME ALKQKARRGE LFFSVAVGYV KVGRDKIEMD
PDLRVREAIG LVFTRFAEMQ SIRQVFLSLR GDQIALPYID PKVSGQHHVL WKLPVYTTVS
NLLTNPVYAG AYAFGRTGSR MTIENGRKRI VRGRRKDRSD WAVLLVDHHE GYLSWADFER
NQRLIADNAN GKGMMVRGPV RKGEALLTGL LRCGHCGRRL LVSYNGTKGD VGRYNCDATR
SNPGAAPCIS FGALRVDEAV GAEIVRLLQP LGVEAAIQAI TQCEHQSGEK QRQVELALEQ
VRYEATRARR QYDTVDPDNR LVAGELERRW NAALAAVRAL EEELEALLRQ RPATLGAEER
KRLLQMGADL EAAWHHPAAT AVTRKRIIRV VLREVVACVE DDQIHLLLHW QGGDHTRLMV
RKNRRGQTRW AVEPETVELI RACARLMPDK AIAGMLNRTG KRTGRLNGWT QSRVRGFRNT
HGITVYRDSE WAERGEVTLP EAARMLNLSP LAVLRQIRAG GIPAKQYYAG APWVIKRRDI
KDPHVIERVR ACCKSPSSSN PNQKTFVFQ
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