Gene Nham_3863 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3863 
Symbol 
ID4030102 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp4241915 
End bp4243096 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content59% 
IMG OID637972252 
Producthypothetical protein 
Protein accessionYP_579026 
Protein GI92119297 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGAGC GTGGCCAACT GATTGCTGAA CGCCTCAAGG CTCAGCTTGG TGCCGACGCT 
TTTTCAGCTT GGTTCCAAAC CGCTAACATC GAACTCACCG ATGCTAGGGT AACCGTGACG
GTCAGCACCC AGCTCGCCGC CAACATCATC ACCAGAAACT ATGCGGATGA TGTGAAGGCG
GCCGCGTCGC ATATCGCTGG CGCACCGGTA TCGGTCGCTG TTGTCGCACA TGGGCAGAAA
GCTCCCATCG ATGTCGCGCC GATTGAGAAA ATCCTGCGCG CGGTCGCGCC CGATGACGCG
CAGCGCGATT TTTTCATTCC GGAATTATCG GAATTGGCGC TCAAGGACGA TGTGCACCTT
ATGGAGATGA CGCCGTTCAC ACTCGACCGG CGTAAGGAAG TGAGGACTGA GCTGGTCTAT
ACCACGCGGC AGGGCGTGAC CATTCGCGTC AAGGCGATCG GCGATCACTC CCTGCCGACA
ATCGATGACT ACGACCTGGT GCTGATGATG CAGACCTGGC TGGCCGATTT GGCCAACCAA
TACCGCAGCC AGCTTGAACG TTACGAGGCG GAGAAGAAGG CCGGGCGTTC TCCAGCAACG
CCAACCGCGC CGCCGCGCAT GTTCGACATC AGTATCAGCG AGGTGGTGAA GTTCAAACGA
CGCAAGTGGG GCGGCGCGAT CAGCGAGGAT ATCTTGGGAA GCCTCGACCG GCTTTGGAAT
GCAGAGGTGG TGGTCGACCC GATGAAGGGA ACGAAGTATC GCGGTGGCAA ATTCCGGCTG
GTAGGCAGTG CCTACGAGAA ATTGGCGGAA ACCAACACCG GCGCAGCCAC GCGAATCCGC
GTTGCGGTGC CAGACTGGAT TTACGCGGGC ATTGTCGAGC GCGCCGTGCC CATGCTGAAA
ACCTTCAACC GCGATTACAT GATCCTCTCG CAGCCGCTGC ATCGTGCGCT GTATCGCTTT
TTGTCGTTGA AGGTGCCGAA GGACGGCACA CCCTACAGCC TGTCGCTGGT CGAATTGGCA
GAGCGGTTTC AAGCCAAGCA GCAGCAAAAG TATTTCAATC GCGACTTAAA GAAAGCCGTG
GCGGGCTGCC CAGATGGCCG GCTGCTAGAG TTTCGGCTTG AGTTGATAGG CAAAGGCGAC
GACCGAGCAC TGCGCGCGTG GCGCCCCTTG CAAGTCGAGT GA
 
Protein sequence
MTERGQLIAE RLKAQLGADA FSAWFQTANI ELTDARVTVT VSTQLAANII TRNYADDVKA 
AASHIAGAPV SVAVVAHGQK APIDVAPIEK ILRAVAPDDA QRDFFIPELS ELALKDDVHL
MEMTPFTLDR RKEVRTELVY TTRQGVTIRV KAIGDHSLPT IDDYDLVLMM QTWLADLANQ
YRSQLERYEA EKKAGRSPAT PTAPPRMFDI SISEVVKFKR RKWGGAISED ILGSLDRLWN
AEVVVDPMKG TKYRGGKFRL VGSAYEKLAE TNTGAATRIR VAVPDWIYAG IVERAVPMLK
TFNRDYMILS QPLHRALYRF LSLKVPKDGT PYSLSLVELA ERFQAKQQQK YFNRDLKKAV
AGCPDGRLLE FRLELIGKGD DRALRAWRPL QVE