Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_3788 |
Symbol | |
ID | 4029705 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | + |
Start bp | 4169169 |
End bp | 4169966 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637972192 |
Product | transposase, IS4 |
Protein accession | YP_578966 |
Protein GI | 92119237 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3293] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0999364 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCAGGA TCGCCCGGAA GACCAAGCGC TATCCGTCTG ACCTGACGGA CGAGGAATGG GAGCGGATCG CGCCGCTGAT GCCGAAACCC GGACGCAGGG GCCGGCCCCG CGAAGTCGAA TTTCGCGAAG TTATCAACGC GGTGCGCTAT CTCGTGCGCT CGGGCTGCGG CTGGCGGATG CTGCCTGTGC ATTTCGGTCA CTGGCGGACG GTCTACGGCT GGTTCCGCGA GTTGGCGCGG CGCTTCCTGT TCCAGACGAT CCATGACGTC GAACTGATGC TCGATCGGGA ACGGCAAGGG CGTGAAGCAA GCCCGTCTGC TGCGGTGATC GACAGTCAGT CGGTCAAAGC GCCGCATGGC GAGACACGCG GCTATGATGC CGGCAAGAAA ATCGTCGGCC GAAAGCGTCA TATCGCGGTC GATACAGACG GGCGATTGCT GATGATCAAT CTGACAACTG CCGACATCTC CGACAGCGCC GGCGCGCAAG CAATCCTCGA TGCGATCCGC AAACGCTGGC CGTGGGTAAA ACATCTGTTC GCCGACGCCG CCTACGACCG GCTGAAACTG ATGGACAAGG CCGCCTATCT ACAGTTCGCA CTTGAAATCA TCCGACGCCG CGACGGGCAG AAGGGCTTCG AAGTCCTGCC GCGCCGCTGG GTGGTCGAAC GAACTTTCGG CTGGATGATC CGCGGGCGCA GACTCGTGCG TGATTACGAA CGTCGCATCG ATGTATCAAC CGCAATGATC CACGTCGCCA TGGGCGGTGT TCTCATCCGC AGAAACGCTC ATCCCTGA
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Protein sequence | MARIARKTKR YPSDLTDEEW ERIAPLMPKP GRRGRPREVE FREVINAVRY LVRSGCGWRM LPVHFGHWRT VYGWFRELAR RFLFQTIHDV ELMLDRERQG REASPSAAVI DSQSVKAPHG ETRGYDAGKK IVGRKRHIAV DTDGRLLMIN LTTADISDSA GAQAILDAIR KRWPWVKHLF ADAAYDRLKL MDKAAYLQFA LEIIRRRDGQ KGFEVLPRRW VVERTFGWMI RGRRLVRDYE RRIDVSTAMI HVAMGGVLIR RNAHP
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