| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3645 |
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| Symbol | |
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| ID | 4031369 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 4014279 |
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| End bp | 4015484 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637972057 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_578833 |
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| Protein GI | 92119104 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.218866 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGAAAA TTTCCGGTTT GTCGGCCGCT TTGATCGCCG CTGCGGTTGC AATGTCGTCT
GGTTCGGCCG TGGCAAAGGA CATCGTCCTG GGGGCGTCCG TACAATTGAC GGGACCTGTT
GCCAATACCG GCCGGTATTA TCGTGACGCC TATCAACTCG CAGTCGACAA GATCAACGAA
GCCGGCGGAG TCAAGGTCGG TCATGAAACA TACACGCTCG CGCTCAAACT TTATGACAAT
CAGTCGGACG TCAATTTGAG CGTGCGTCAG TACACGCAAC TGGTTTCACG GGACAAAGTG
AATTTTCTGC TGGGGCCGTT CGCAAGCAAT TTCGCGCTGG CGGATTCGGC TGTGTCCGAA
AAGTACCAGA TTCCGATGGT CCAGGGCGGC GGCGCGTCGG ACCAGATCTT CTCGCGCAAG
TTCAAATATA TTTTTGGAAC GCTGGCGCCG GCCAGCCACT ATTTCGGCTC GACGGTGGAG
ATGATGAAGG GGCTCGATCC GGCCCCGAAA TCGGTCGCCC TGCTTTATGC CGACGATGCC
TTTGACGTCT CGGTAGCGGA AGGAACGCGG CCCAAACTGA AAGAGGCGGG CCTCACCCTG
GCCATGGACG AGCGTTACAG CACCAATGCG ACGGACTTCA ACTCGCTGCT CTCGCAGATC
AAGAGCAAGA ACGTCGATGC GGTGTTGGTG GCGGGCCACG AAACCGAAAT TCTGAATTTC
GTGCGGCAGG CCAAGAGTCT TGCGGTCGCC CCGAAGATGT ATTCCTTCAC GGTGGGCGTT
CCCAGCGAGG ATTTCCGCAA GGCTCTCGGT AAAGATGCCG ACTATGCTTT CGGCATGACG
GCGTGGCTGC CTTCCGCCGA CCTCAAGGAT CAATGGTTCG GCGATGCTGC GCAATTCGCC
TCGGCCTTCA AGGCGAAGTT CAACTACGAC CCGGACTATC ATGCCGCGTC CGGCGCGGCC
GACGTCGAGG CCTTGGTGAA AGCCGTGGAA GATGCGGGCA CGATCGACCC CGCAAAAGTA
AGGGACGCAT TGTCGAAGGT GGATTTCGAC AGTCTTTACG GGCGGATTGC GTTCAATGAG
AATGGCCAGA TCGATCTGCC GCAGACCGTG ATCCAGATCC AGGATGGCAA GCTGGTCGCG
ATCCAGGGCG TCCACGGTAA AATCGCGGCG CCGAAATATC CGATGCCGGC ATGGGACGCG
CGCTAG
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| Protein sequence | MLKISGLSAA LIAAAVAMSS GSAVAKDIVL GASVQLTGPV ANTGRYYRDA YQLAVDKINE
AGGVKVGHET YTLALKLYDN QSDVNLSVRQ YTQLVSRDKV NFLLGPFASN FALADSAVSE
KYQIPMVQGG GASDQIFSRK FKYIFGTLAP ASHYFGSTVE MMKGLDPAPK SVALLYADDA
FDVSVAEGTR PKLKEAGLTL AMDERYSTNA TDFNSLLSQI KSKNVDAVLV AGHETEILNF
VRQAKSLAVA PKMYSFTVGV PSEDFRKALG KDADYAFGMT AWLPSADLKD QWFGDAAQFA
SAFKAKFNYD PDYHAASGAA DVEALVKAVE DAGTIDPAKV RDALSKVDFD SLYGRIAFNE
NGQIDLPQTV IQIQDGKLVA IQGVHGKIAA PKYPMPAWDA R
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