| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_3612 |
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| Symbol | |
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| ID | 4030381 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 3976505 |
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| End bp | 3977935 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637972023 |
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| Product | major facilitator transporter |
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| Protein accession | YP_578800 |
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| Protein GI | 92119071 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.384434 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACCGGA TCGTCGAGAC AGACATTCCC GCGCGTCTCG ACAGCCTGCG CTGGAGCCCG
TTTCATACGC GGGTCGTAAC CGCCCTCGGA ATCACATGGA TACTGGACGG GCTGGAGGTG
ACGCTCGCCG GAACATTGTC CGGCGCGCTC AAGGACAGTC CCACGCTGCG CTTCACCAAC
CTCGATATCG GCCTCGCCAG CAGCGCCTAT CTTGTCGGTG CCGTGCTCGG GGCGGTGGTC
TTCGGCTGGT TGACGGACAG GATCGGGCGC AGGAAACTTT TTTTCGTCAC GTTGACCCTC
TATCTGACTG CGACGGCAGC GACCGCGCTG TCATGGGATA CCGGCAGCTT CGCGCTGTTC
CGGTTTCTCA CCGGCGCAGG CATCGGGGGC GAATACACCG CGATCAATTC GACGATTCAG
GAACTGGTGC CGGCGCGTTA CCGCGGATGG ACCGACCTGA CCATCAACGG CAGTTTCTGG
CTCGGCGCCG CCCTCGGTGC GGTCGGCGCG ATCGTGCTGC TCGATCCGCA ACTGATCGAT
CCCGAACTGG GCTGGCGGCT CGCGTTCCTG ACCGGCGCCG TGCTGGGACT AGTGGTGTTT
GTGATGCGGC TATGGATTCC GGAAAGCCCG CGCTGGCTGA TGATTCACGG ACGGCCGGAT
CAAGCGGTCC GCATCGTTGC CGACATCGAA CGGATGGCGG CTCGCGATCC GGATGCGCCC
GCCGACGGGG GCTGGCCGAC GATCCGGCTT CGGATGCGCG ACCACACGCC GCTGCGCGAG
GTGGCGCGAA CGCTGTTCTG CGCATACCGG CAGCGGTCGC TGGTCGGCCT TGCGCTGATG
ACCGCGCAGG CGTTCTTCTA CAATGCGATC TTCTTCACAT ACGCGCTGGT GCTGTCGACC
TTCTTCGGCA TTCCGTCGGA TCGGATCGGC TGGTACATCC TGCCGTTCGC GGCGGGCAAT
TTTCTCGGAC CGCTGTTGCT CGGGCGGCTG TTCGATACGG TCGGACGCCG CGCGATGATC
GCCTTCACCT ATGGGATATC CGGTATTCTG CTGACCGTAT CAGGCTATCT CTTCGCCGCC
GGCGTTCTCA CCGCGCAGAC GCAGACGATC GCGTGGATGG TGATTTTCTT CTTCGCCTCG
CCGGCCGCCA GCGCGGCCTA CCTGACCGTC AGCGAGACCT TTCCCCTTGA AGTGCGGGCG
CTGGCGATCG CGATGTTTTA TGCCATCGGG ACCGGAATCG GCGGCGTCGC CGGTCCTGCG
CTGTTCGGCG CCTTGATCGA CAGCGGCTCG CGTGACAGCG TGTTCGCAGG ATATTGTCTC
GGATCGGCGT TGATGATCGC TGCGGCGCTG ATCGGCTGGC GATACGGGGT TGCCGCCGAA
CGGCGCCCGC TCGAATCGGT GGCGTCGCCG CTCGCCGTTG TGGAGTCATG A
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| Protein sequence | MDRIVETDIP ARLDSLRWSP FHTRVVTALG ITWILDGLEV TLAGTLSGAL KDSPTLRFTN
LDIGLASSAY LVGAVLGAVV FGWLTDRIGR RKLFFVTLTL YLTATAATAL SWDTGSFALF
RFLTGAGIGG EYTAINSTIQ ELVPARYRGW TDLTINGSFW LGAALGAVGA IVLLDPQLID
PELGWRLAFL TGAVLGLVVF VMRLWIPESP RWLMIHGRPD QAVRIVADIE RMAARDPDAP
ADGGWPTIRL RMRDHTPLRE VARTLFCAYR QRSLVGLALM TAQAFFYNAI FFTYALVLST
FFGIPSDRIG WYILPFAAGN FLGPLLLGRL FDTVGRRAMI AFTYGISGIL LTVSGYLFAA
GVLTAQTQTI AWMVIFFFAS PAASAAYLTV SETFPLEVRA LAIAMFYAIG TGIGGVAGPA
LFGALIDSGS RDSVFAGYCL GSALMIAAAL IGWRYGVAAE RRPLESVASP LAVVES
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